Job Description P0A7R9 Confidence 23.71% Date Thu Jan 5 11:06:06 GMT 2012 Rank 45 Aligned Residues 90 % Identity 21% Template c3iz5Q_ PDB info PDB header:ribosome Chain: Q: PDB Molecule:60s ribosomal protein l5 (l18p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		26	.	.	.	30	.	.	.	.	.			.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure												.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	N	N	T	I	V	T	I	T	.	.	D	R	Q	G	.	N	A	L	G	W	A	T	A	G	G	S	G	F	R	G	S	R	.	.	K	S	T	P	F	A	A	Q	V	A	A	E	R	C	A	D	A	V	K	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	K	D	I	T	A	Q	I	V	Y	A	T	I	A	G	D	I	V	M	A	A	A	Y	S	H	E	L	P	R	Y	G	L	E	V	G	L	T	N	Y	A	A	A	Y	C	T	G	L	L	L	A	R	R	V	L	T	L	R	G	L	D	Q	E	Y	E	G	N	V	E	A	T	G	E	D	Y	Y	V	E	P	A
Template Known Secondary structure			S	S											T	T										T	T	T	G	G	G	G	S			S		T	T	S																	T	T		S	S						S	S	S				S				S	S			S
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
									78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	I	K	N	L	E	V	M	V	K	G	P	G	P	G	R	E	S	T	I	R	A	L	N	A	A	G	F	R	I	T	N	I	T	D	V	T	P	I	P	H	N	G	C	R	P	P
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		D	E	R	R	P	F	R	A	L	L	D	V	G	L	I	R	T	T	T	G	N	R	V	F	G	A	L	K	G	A	L	D	G	G	L	D	I	.	.	.	.	.	.	.	.	.	P	H	S	D	K	R	F	A
Template Known Secondary structure		S		S				S						T	T					S	S												T	T	T				.	.	.	.	.	.	.	.	.				S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions