Job Description P0A7R9 Confidence 68.81% Date Thu Jan 5 11:06:06 GMT 2012 Rank 15 Aligned Residues 99 % Identity 20% Template c2zkrn_ PDB info PDB header:ribosomal protein/rna Chain: N: PDB Molecule:rna expansion segment es27; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.		.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.		.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	G	V	A	H	I	H	A	S	F	N	N	T	I	V	T	I	T	D	R	Q	.	.	G	.	N	A	L	G	W	A	T	A	G	G	S	G	F	R	G	S	R	.	.	K	S	T	P	F	A	A	Q	V	A	A	E	R	C	A	D	A	V	K	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.		.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.		.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	Y	R	M	I	V	R	V	T	N	R	D	I	I	C	Q	I	A	Y	A	R	I	E	G	D	M	I	V	C	A	R	Y	A	H	E	L	P	K	Y	G	V	K	V	G	L	T	N	Y	A	A	A	Y	C	T	G	L	L	L	A	R	R	L	L	N	R	F	G	M	D	K	I	Y	E	G	Q	V	E	V	T
Template Known Secondary structure			S									T	T											S	S	S									G	G	G	G	G	G	T				S		S	S	S																				S						S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
															78	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	N	L	E	V	M	V	.	.	.	.	K	G	P	G	P	G	R	E	S	T	I	R	A	L	N	A	A	G	F	R	I	T	N	I	T	D	V	T	P	I	P	H	N	G	C	R	P	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	E	Y	N	V	E	S	I	D	G	Q	P	G	A	F	T	C	Y	L	D	A	G	L	A	R	T	T	T	G	N	K	V	F	G	A	L	K	G	A	V	D	G	G	L	S	I	.	.	.	.	.	.	.	.	.	P	H	S	T	K	R	F	P
Template Known Secondary structure		S						S	S	S		S	S	S				B						T	T	S				T	T													T	T		B		.	.	.	.	.	.	.	.	.				G	G	G	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.										.	.	.	.	.	.	.	180

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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