Job Description P0A7R9 Confidence 96.75% Date Thu Jan 5 11:06:06 GMT 2012 Rank 8 Aligned Residues 76 % Identity 20% Template c2jl8S_ PDB info PDB header:ribosome Chain: S: PDB Molecule:50s ribosomal protein l18; PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 4 of 4).3 this file contains the 50s subunit. Resolution 3.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		P	I	R	A	R	K	R	V	R	K	Q	V	S	D	G	V	A	H	I	H	A	S	F	N	N	T	I	V	T	I	T	D	R	Q	G	.	N	A	L	G	W	A	T	A	G	G	S	G	F	R	G	S	R	K	S	T	P	F	A	A	Q	V	A	A	E	R	C	A	D	A	V	K	E	Y	G	I	K	N	L	E
Query Conservation																																					.
Alig confidence														.																							.																.	.	.
Template Conservation														.																																							.	.	.
Template Sequence		K	F	R	V	R	N	R	I	K	R	T	G	.	R	L	R	L	S	V	F	R	S	L	K	H	I	Y	A	Q	I	I	D	D	E	K	G	V	T	L	V	S	A	S	S	L	A	L	K	L	K	G	.	.	.	N	K	T	E	V	A	R	Q	V	G	R	A	L	A	E	K	A	L	A	L	G	I	K	Q	V	A
Template Known Secondary structure							S	S	S	S			S	.	S									S	S									T	T	T	T								S	G	G	G				S	.	.	.		S																	T	T	T			B
Template Predicted Secondary structure														.																																							.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		84
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions