Return to main results Retrieve Phyre Job Id

Job DescriptionQ46829
Confidence85.95%DateThu Jan 5 12:34:51 GMT 2012
Rank190Aligned Residues84
% Identity12%Templated2bhua3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90. ........100.........110.........120.........130.. .. ...
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Query Sequence  IKLFAEMGFKCFRTS. . . . . . . . . . . . . . . IAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITL. . SH. . FEM
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Template Sequence  LPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAP. . YG. . . . . RPEDLMALVDAAHRLGLGVFLDVVYNHFGPSG
Template Known Secondary structure  T





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   150.........160.........170.........180........ .190 .........200.........210.........220..
 
   138.140........ .150.........160.........
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Query Sequence  PLHLVQQYGSW. . . . . . . . . . . . . . . . TNRKVVDFFVRFAEVVFERYK
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Template Sequence  N. YL. SSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYH
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   223 .. ....230.........240.........250.........260........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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