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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank47Aligned Residues327
% Identity16%Templated1w32a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGF
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Template Sequence  LASLADFPIGVAVAASGGNADIFTSS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ARQNIVRAE. . FNQ
Template Known Secondary structure  GGGG
SS
B
SSSTTBTTT
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S
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   2.......10.........20....... ..30...... ...
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  KCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVF
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Template Sequence  ITAENIMKMSYMYS. . . GSNFSFTNSD. . . RLVSWAAQNGQTVHGHALVWHPSYQL. PNWASDSNANFRQDFARHIDTVA
Template Known Secondary structure  SSTTSGGGG...TT

...TT



GGG
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TT
STT
TT
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   40.........50... ......60... ......70.........80......... 90.........100.........110..
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  ERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMV
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Template Sequence  AHFAGQVKSWDVVNEALFDSADDPDGRGSA. . . . . . . NGYRQSVFYRQFGGPEYID. . EAFRRARAADPTAELYYNDFN.
Template Known Secondary structure  TTTT
S

B

GGG
TT


.......TT

TST..
TTSSS.
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   113......120.........130.........140.. .......150.........160. ........170.........180..
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  PLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . TEENGAKTTALVNLVQRLLNNG. . . . . . . . . . . . . . . VPIDGVGFQMH. . . . . . . .
Template Known Secondary structure  ........................TTS
STT...............





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   183......190.........200.... .....210.....
 
   326...330.........340.........350.........360........ .370.........380.........390....
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Query Sequence  GGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYER. YQRPLFIVENGFGAYDKVEEDGSIND. . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . VMNDYPSIANIRQAMQKIVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSC
Template Known Secondary structure  ......................SSSS
TT
SS
S

TTSS
SSS


SGGGGSS

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   216...220.........230.........240.........250.........260.........270...
 
   395....400.........410.........420.........430... ......440.........450.........460........
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Query Sequence  . . . DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSF. . . TTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWY
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Template Sequence  AGLDRQKARYKEIVQAYLEVV. . PPGRRGGITVWGIADPDSWLYTHQN. LPDWPLLFNDNLQ. . . . . . . . . . PKPAYQGV
Template Known Secondary structure  S..
TT
S
SBGGGSTTSTT.


SSB
TTS
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   274.....280.........290.... .....300.........310......... 320.........330.. .......340
 
   469470...
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Query Sequence  KEVIA
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Template Sequence  VEALS
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   341....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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