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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank37Aligned Residues302
% Identity16%Templated1v6ya_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  LPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKC
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Template Sequence  AQSGRYFGTAIASGKLGDS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYTTIASRE. . FNMVT
Template Known Secondary structure  TTT

GGGTT
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S
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   10.........20........ .30....... ..40..
 
   88.90.........100.........110.........120....... ..130.........140.........150.........160.....
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Query Sequence  FRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIE. . PVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVF
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Template Sequence  AENEMKIDATEP. . QRGQFNFS. . . AGDRVYNWAVQNGKQVRGHTLAWHSQQPGWM. . . . QSLSGSTLRQAMIDHINGVM
Template Known Secondary structure  SSTTS
S..BTTB


...TT
SSS

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   43......50.... .....60.. .......70.........80.........90... ......100.........110...
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  ERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMV
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Template Sequence  GHYKGKIAQWDVVNEAFSDDGSGGRRDSNLQRTGND. . . . . . . . . . . . . . . . . . . WIEVAFRTARAADPAAKLCYNDYNI
Template Known Secondary structure  TTT



B
SSSS

B


TTGGG
TT...................
TTSSS
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   114.....120.........130.........140......... 150.........160.........170....
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  PLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAE
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Template Sequence  ENWTWAKTQGVYNMVRDFKQRG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VPIDCVGFQSH. . . . . . . .
Template Known Secondary structure  SSTTST.......................................





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   175....180.........190...... ...200.......
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  GGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . LIVGQVPGDFRQNLQRF. ADLGVDVRITELDIRMRTPS. . . . . . . DATKLATQAADY
Template Known Secondary structure  .......................TT


TT.TTT
SS
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   208.210.........220.... .....230.........240.... .....250......
 
   406...410.........420.........430... ......440.........450.........460.........470....
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Query Sequence  EEMKKAVTYDGVDLMGYTPWGCIDCVSF. . . TTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIAS
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Template Sequence  KKVVQACM. QVTRCQGVTVWGITDKYSWVPDVFP. GEGAALVWDASYA. . . . . . . . . . KKPAYAAVMEAFGS
Template Known Secondary structure  .T
TTS
SBGGG
SST.T

SSB
TTS
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   257..260.... .....270.........280......... 290.........300.. .......310......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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