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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank30Aligned Residues425
% Identity24%Templated1uwsa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGF
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Template Sequence  YSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGD. . . . . . LPENGPGYWGNYKTFHDNAQKMGL
Template Known Secondary structure 

TT


S
SSTT




B
TSS
S
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GGGS

TT
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   2.......10.........20.........30.........40.........50. ........60.........70.....
 
   86...90.........100.. .......110.........120.........130.........140.
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Query Sequence  KCFRTSIAWTRIFPKGD. . . . . . . . . . . . . . . . . . . . . . . . EAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHL
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Template Sequence  KIARLNVEWSRIFPNPLPRPFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWL
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S






TT
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TTS
TT
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BTTT
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   142... ....150.........160.........170.........180.........190.........200.........210.
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Query Sequence  VQQY. . . . . . . . . . GSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETM
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Template Sequence  HDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGV. . . . . KSGFPPGYLSFELS
Template Known Secondary structure  B
TT

SS
BGGGSTTT
S
T
G.....GG

TT



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   158.160.........170.........180.........190.........200.........210........ .220.........230..
 
   212.......220.........230.........240.........250.........260...... ...270.........280.........290
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Query Sequence  YQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRE. RYVFTDVQLRGYYPSYVLNEWERR
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Template Sequence  RRAMYNIIQAHARAYDGIKSVS. KKPVGIIYANSSFQPLT. . DKDMEAVEMAENDNRWWFFDAIIRGEITKIVRDDL. . .
Template Known Secondary structure  TT
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S
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TTT...
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   233......240.........250.... .....260.........270. ........280.........290.........300......
 
   291........300.........310.........320.........330..... ....340.........350.........360.....
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Query Sequence  GFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGF. . . . . EGSVPNPYVKASDWGWQIDPVGLRYALCEL
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Template Sequence  . . . . . . . . . . . . . . . KGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEGLYDVLTKY
Template Known Secondary structure  ...............TT

S
SSS
TTSTTSS
SSSB
TTS
BB
TT

B

T
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   311........320.........330.........340.........350.........360.........370.....
 
   366...370.........380.........390.........400.........410.........420.........430.........440.....
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Query Sequence  YERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFI
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Template Sequence  WNRYHLYMYVTENGIADDA. . . . . . . . . DYQRPYYLVSHVYQVHRAIN. SGADVRGYLHWSLADNYEWASG. FSMRFGLL
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TT.........
SS.TT

S
SB



GGGG.GGS


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   376...380.........390.... .....400.........410.... .....420.........430...... ...440....
 
   446...450.........460.........470........
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Query Sequence  YVNKHDDGTGDMSRSRKKSFNWYKEVIASNGEK
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Template Sequence  KVDYN. . . . . TKRLYWRPSALVYREIATNGAIT
Template Known Secondary structure 
TT.....T


T
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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