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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank31Aligned Residues422
% Identity34%Templated1ug6a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution0.99

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
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Query Sequence  KDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFR
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Template Sequence  EKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEP. . . . . . . . . . ACDHYRRYEEDIALMQSLGVRAYR
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TTSTT


BTTSTTSSTTS

SSS..........TT
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   6...10.........20.........30.........40.........50. ........60.........70.....
 
   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  TSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYK
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Template Sequence  FSVAWPRILPEG. RGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEER. GGWRSRETAFAFAEYAEAVARALA
Template Known Secondary structure 

STTS.SS


TT
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BTT.TGGGST
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   76...80....... ..90.........100.........110.........120......... 130.........140.........150...
 
   170.........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  HKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLYP
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Template Sequence  DRVPFFATLNEPWCSAFLGHWTG. . . . . . . EHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGAR. RVGIVLNFAPAYG
Template Known Secondary structure  TT


TS
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   154.....160.........170...... ...180.........190.........200.........210.. .......220.....
 
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Query Sequence  YSCNPDDVMFAQESMRE. RYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGT
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Template Sequence  E. . . . . DPEAVDVADRYHNRFFLDPILGKGYPESPFR. . . . . DPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGT
Template Known Secondary structure  S.....
TTTS
S
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TTT


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   226 ...230.........240.........250....... ..260.........270.........280.........290.....
 
   329330.........340.........350.........360.........370.........380.........390.........400........
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Query Sequence  GDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEM
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Template Sequence  LPVRYL. . . . . . PPEGPATAMGWEVYPEGLYHLLKRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAA
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SS
B
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   296...300. ........310.........320.........330.........340.........350.........360.........
 
   409410.........420.........430.........440.........450.........460.........470....
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Query Sequence  KKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIAS
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Template Sequence  LRARE. EGVDLRGYFVWSLMDNFEWAFG. YTRRFGLYYVDFP. . . . . SQRRIPKRSALWYRERIAR
Template Known Secondary structure  .T


SB



GGGG.GGS


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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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