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Job DescriptionQ46829
Confidence99.87%DateThu Jan 5 12:34:51 GMT 2012
Rank66Aligned Residues308
% Identity21%Templated1r85a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  LPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKC
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Template Sequence  YKNEFTIGAAVEPYQLQNE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDVQ. . MLKRHFNSIV
Template Known Secondary structure  TTT

GGGGG
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S
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   24.....30.........40.. .... ...50......
 
   88.90.........100.........110.........120......... 130.........140....... ..150..
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Query Sequence  FRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPV. . ITLSHFEMPLHLVQQYGS. . . . . . . . . . . . . WTNRK
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Template Sequence  AENVMKPISIQP. . EEGKFNFEQAD. . . RIVKFAKANGMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQL
Template Known Secondary structure  SSTTS
S..BTTB


...TT

S

STT

GGGGB
TTSSBGGG


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   57..60........ .70......... 80.........90.........100.........110.........120.........130.
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  VVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRI
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Template Sequence  LLKRLETHIKTIVERYKDDIKYWDVVNEVV. . . . . . . . . . . . . . . . . . GDDGKLRNSPWYQIAGIDYIK. . VAFQAARKY
Template Known Secondary structure  TTT

S
B..................
TTSSB


TT..
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   132.......140.........150.........160. ........170.........180.. .......190.
 
   233......240.........250.........260.........270.........280.........290.........300.........310.
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Query Sequence  . NPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDY
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Template Sequence  GGDNIKLYMNDYNTE. . . . . . . . . . . . . . . . . . . . . . . . . . VEPKRTALYNLVKQLKEEG. . . . . . . . . . . . . . . VPIDG
Template Known Secondary structure 
TTSS
TT..........................STTTT...............



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   192.......200...... ...210.........220..... ....230
 
   312.......320.........330.........340.........350.........360.........370.........380.........390.
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Query Sequence  LGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGS
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Template Sequence  IGHQSHIQIG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WPSEAEIEKTINMF. AALGLDNQITELDVSMYGWPPRAYP
Template Known Secondary structure 


SS..............................SS
.TT

SS
SS



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   231........240 .........250.... .....260.........270.........
 
   392.......400. ........410.........420.........430.........440...
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Query Sequence  INDDYRIDYL. . . RAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYG. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIADNHTWLDS. RADVYYDANGNVVVDPNAPYAKVEKGKGKDA
Template Known Secondary structure  SGGGS
TGGGSSSSTTS
GGGG.G


TTS


TTS

STT
S


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   280.........290.........300.........310.........320....... ..330.........340.........350........
 
   444.....450.........460.........470
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Query Sequence  . . FIYVNKHDDGTGDMSRSRKKSFNWYKE
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Template Sequence  PFVF. . . . . . . . . . GPDYKVKPAYWAIID
Template Known Secondary structure 
SSB..........
TTSBB
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   359360.. .......370.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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