 |
| Job Description | Q46829 | | Confidence | 79.58% | Date | Thu Jan 5 12:34:51 GMT 2012 |
| Rank | 209 | Aligned Residues | 46 |
| % Identity | 24% | Template | d1pama4 |
| SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
| Resolution | 1.80 |
|
| | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
| Predicted Secondary structure | |
 | | | |
|
|
|  | | |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| | | |
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | | | | | |
|
|
| | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
F | A | E | M | G | F | K | C | F | R | T | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | A | W | T | R | I | F | P | K | G | D | E | A | Q | P | N | E | E | G | L | K | F | Y | D | D | M | F | D | E | L | L | K | Y | N | I | E | P | V | I | T | L |
| Query Conservation | |
| | |
|
| | | |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| |
| |
| | |
| | |
| | |
|
| | |
| | |
|
|
| |
| | | |
|
| |
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
|
| | |
| |
| |
|
| | | | | | | | | | | | | | | | | | | |
|
| | | |
| | | |
|
| | | |
| . | . | . | . |
| | |
|
|
| . | . | . | |
|
| | | |
| | |
|
| |
|
|
|
| |
| Template Sequence | |
L | T | G | M | G | I | T | A | I | W | I | S | Q | P | V | E | N | I | Y | S | V | I | N | Y | S | G | V | N | N | T | A | Y | H | G | Y | W | A | R | D | F | K | K | T | N | P | A | Y | G | . |
. |
. |
. |
T | M | Q | D | F | K | . |
. |
. |
N | L | I | D | T | A | H | A | H | N | I | K | V | I | I | D | F |
| Template Known Secondary structure | |
T | G | G | G | T |
|
| | | | |
|
|
| | | |
|
|
|
| | | | T | T | | | |
|
| T | T | S |
| S | | | | | | | |
| T | T | T |
| . | . | . | . |
| | | | | | . | . | . | | | | | | | | | T | T |
| | | | | | |
| Template Predicted Secondary structure | |
| | |
|
|
|
| | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
| | | | | | . | . | . | | | | | | | | |
|
|
| | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
. | . | . | . | . | . | |
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
