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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank46Aligned Residues309
% Identity17%Templated1n82a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  TLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFK
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Template Sequence  VFANDFRIGAAVNPVTIE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MQKQ. . LLIDHVNSI
Template Known Secondary structure  TTTT

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S
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   11........20........ .30.. .......40.
 
   87..90.........100.........110.........120....... ..130.........140....... ..150.........160.
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Query Sequence  CFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIE. . PVITLSHFEMPLHLVQQYGS. . . WTNRKVVDFFVRFA
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Template Sequence  TAENHMKFEHLQP. . EEGKFTFQEAD. . . RIVDFACSHRMAVRGHTLVWHNQTPDWVFQD. GQGHFVSRDVLLERMKCHI
Template Known Secondary structure  SSTTS
S..BTTB


...TT
SSS

GGGGB
.SSSSB

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   42.......50.... .....60..... ....70.........80.........90...... ...100.........110.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  EVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCM
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Template Sequence  STVVRRYKGKIYCWDVINEAVADEGDELLRPSKWRQIIGDD. . . . . . . . . . . . . . . . . . FMEQAFLYAYEADPDALLFYN
Template Known Secondary structure  TTT

S
B
SSSS
SB



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   116...120.........130.........140.........150...... ...160.........170.......
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  LAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNA
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Template Sequence  DYNEC. . . . . . . . . . . . . . . . . . . . . . . . . . FPEKREKIFALVKSLRDKG. . . . . . . . . . . . . . . IPIHGIGMQAHWSLT
Template Known Secondary structure  SSTT..........................STT...............





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   178.180.. .......190.........200. ........210......
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  VKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYL
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Template Sequence  RPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LDEIRAAIERY. ASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIE
Template Known Secondary structure  SS
...............................TTT
SS
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SS

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   217.. 220.........230 .........240.........250.........260.....
 
   402 .......410.........420.........430.........440 .........450.........460.........470.
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Query Sequence  R. . AHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSK. . . . . RYGFIYVNKHDDGTGDMSRSRKKSFNWYKEV
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Template Sequence  RQAERYGQIFALFKEYRDVIQSVTFWGIADDHTWLDN. FPVHGRKNWPLLFDEQHK. . . . . . . . . . PKPAFWRAVSV
Template Known Secondary structure  TTTTS
SBTTS
GGGT.SSSTT




SSB
TTS
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   266...270.........280.........290.........300.. .......310.........320 .........330.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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