Return to main results Retrieve Phyre Job Id

Job DescriptionQ46829
Confidence89.46%DateThu Jan 5 12:34:51 GMT 2012
Rank177Aligned Residues132
% Identity11%Templated1j0ha3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100. ........110.
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Query Sequence  DVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKG. . . . . . DEAQPNEEGL
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Template Sequence  ERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDK
Template Known Secondary structure  GGT

S
GGGS
TT


TTSS


SS





TT





SSSS

S
S
TTT

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   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   112.......120.........130.. ... ....140...... ...150
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Query Sequence  KFYDDMFDELLKYNIEPVITL. . SHF. . EMPLHLVQQYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SWTN
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Template Sequence  ETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTAN
Template Known Secondary structure  TT


SB

TT
GGG
TTGGGB
BSSSS


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SB
BSTT
TTSBBB
TTS
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   223......230.........240.........250.........260.........270.........280.........290.........300..
 
   151........160.........
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Query Sequence  RKVVDFFVRFAEVVFERYK
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Template Sequence  PEVKRYLLDVATYWIREFD
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   303......310.........320.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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