Job Description Q46829 Confidence 88.05% Date Thu Jan 5 12:34:51 GMT 2012 Rank 182 Aligned Residues 125 % Identity 10% Template d1gvia3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.3

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	L	T	G	G	A	H	G	V	P	R	E	I	T	K	E	V	L	P	G	K	Y	Y	P	N	H	E	A	V	D	F	Y	G	H	Y	K	E	D	I	K	L	F	A	E	M	G	F	K	C	F	R	T	S	I	A	W	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	F	P	K	G	D	E	A
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																																																														.	.
Template Sequence		E	R	F	A	N	G	N	P	A	I	S	P	K	G	A	R	P	W	G	S	E	D	P	T	P	T	S	F	F	G	G	D	L	Q	G	I	I	D	H	L	D	Y	L	A	D	L	G	I	T	G	I	Y	L	T	P	I	F	R	A	P	S	N	H	K	Y	D	T	A	D	Y	F	E	I	D	P	H	.	.	F	G
Template Known Secondary structure		G	G	T				S					S	S			S				S	S				S	S													T								T										B	S		S	S	S	S	T	T	S		S		T	T	S	B		T	T	.	.	T
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	N	E	E	G	L	K	F	Y	D	D	M	F	D	E	L	L	K	Y	N	I	E	P	V	I	T	L	.	.	S	H	F	E	M	P	L	H	L	V	Q	Q	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.																							.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		D	.	.	.	.	.	K	E	T	L	K	T	L	V	K	R	C	H	E	K	G	I	R	V	M	L	D	A	V	F	N	H	C	G	Y	E	F	A	P	F	Q	D	V	L	K	N	G	A	A	S	R	Y	K	D	W	F	H	I	R	E	F	P	L	Q	T	E	P	R	P	N	Y	D	T	F	A	F	V	P	H	M
Template Known Secondary structure			.	.	.	.	.															T										S	B			T	T											G	G	G		T	T	G	G	G	B		B	S	S	S	S				S	S	S		S	B		B	S	S	S		T	T	S
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		221						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
					147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	W	T	N	R	K	V	V	D	F	F	V	R	F	A	E	V	V	F	E	R	Y	K
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		P	K	L	N	T	A	H	P	E	V	K	R	Y	L	L	D	V	A	T	Y	W	I	R	E	F	D
Template Known Secondary structure		B	B	B		T	T	S																		S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions