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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank15Aligned Residues442
% Identity33%Templated1gnxa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.68

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  KLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMG
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Template Sequence  ALTFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDV. . . . . . . . . . ATDHYHRWREDVALMAELG
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TTSTT


BTSTTSSGGG

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   15....20.........30.........40.........50.........60..... ....70.........80....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  FKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVV
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Template Sequence  LGAYRFSLAWPRIQPTG. RGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENA. GGWPERATAERFAEYAAIA
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SGGG.SSS

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   85....90.........100. ........110.........120.........130.........140... ......150.........160..
 
   165....170.........180.........190.........200.........210.........220.........230..... ....240...
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Query Sequence  FERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPE. MKVGCMLA
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Template Sequence  ADALGDRVKTWTTLNEPWCSAFLGYGSG. . . . . . . VHAPGRTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLN
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   163......170.........180.........190 .........200.........210.........220.........230.....
 
   244.....250.........260...... ...270.........280.........290.........300.........310.........320..
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Query Sequence  MVPLYPYSCNPDDVMFAQESMRE. RYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAV
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Template Sequence  IHHVRPLTDSDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAH. QKLDFLGVNYYSPTLV
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   236...240.........250.........260.........270.........280.........290........ .300.........310....
 
   323......330.........340.........350.........360......... 370.........380.........390.........400.
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Query Sequence  KAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERY. QRPLFIVENGFGAYDKVEEDGSINDDYRIDYL
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Template Sequence  SAHSPWPGADR. . . VAFHQPPGETTAMGWAVDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYV
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SSTT
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B
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B


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   315....320..... ....330.........340.........350.........360.........370.........380.........390.
 
   402.......410.........420.........430.........440.........450.........460.........470......
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Query Sequence  RAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNG
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Template Sequence  RDHLAAVHRAIK. DGSDVRGYFLWSLLDNFEWAHG. YSKRFGAVYVDYP. . . . . TGTRIPKASARWYAEVARTGV
Template Known Secondary structure  .TT


SB



GGGG.GG



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   408.410......... 420.........430.........440. ........450.... .....460.........470.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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