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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank39Aligned Residues296
% Identity19%Templated1fh9a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.72

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
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Query Sequence  KDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFR
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Template Sequence  AGRDFGFALDPNRLSEA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QYKAIA. . DSEFNLVVAE
Template Known Secondary structure  TT

GGGGGS...............................................
SS
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Query Sequence  TSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVI. . TLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFER
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Template Sequence  NAMKWDATEP. . SQNSFSFG. . . AGDRVASYAADTGKELYGHTLVWHSQLPDWA. . . . KNLNGSAFESAMVNHVTKVADH
Template Known Secondary structure  STTS
S..BTTB


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   44.....50... ......60. ........70.........80.........90.. .......100.........110....
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  YKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPL
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Template Sequence  FEGKVASWDVVNEAF. . . . . . . . . . . . . . . . . ADGGGRRQDSAFQQKLGNGYI. . ETAFRAARAADPTAKLCINDYN. . .
Template Known Secondary structure  TTTT



B.................
TTSSB
SS

TT..
SSSSS...
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   115....120......... 130.........140.........150 .........160.........170..
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  YPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . VEGINAKSNSLYDLVKDFKARG. . . . . . . . . . . . . . . VPLDCVGFQSH. . . . . . . . . .
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   173......180.........190.... .....200.....
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  TGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . LIVGQVPGDFRQNLQRF. ADLGVDVRITELDIRMRTPS. . . . . . . DATKLATQAADYKK
Template Known Secondary structure  .....................TT


TT.TTT
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   206...210.........220.. .......230.........240.. .......250......
 
   408.410.........420.........430.........440 .........450.........460.........470.
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Query Sequence  MKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSK. . . RYGFIYVNKHDDGTGDMSRSRKKSFNWYKEV
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Template Sequence  VVQACM. QVTRCQGVTVWGITDKYSWVPD. VFPGEGAALVW. . . . . . . . . . DASYAKKPAYAAVMEA
Template Known Secondary structure  .TSTTS
SBTTT
S.STT

SSB..........
TTS
B
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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