Job Description Q46829 Confidence 91.10% Date Thu Jan 5 12:34:51 GMT 2012 Rank 169 Aligned Residues 96 % Identity 13% Template d1e43a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.7

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																				.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Query Sequence		Y	G	H	Y	K	E	D	I	K	L	F	A	E	M	G	F	K	C	F	R	T	S	I	A	W	T	R	I	F	P	K	G	D	E	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	E	E	.	.	G	L	K	F	Y	D	D	M	F	D	E	L	L	K	Y	N	I	E	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Alig confidence																									.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																									.	.	.	.
Template Sequence		W	K	R	L	Q	N	D	A	E	H	L	S	D	I	G	I	T	A	V	W	I	P	P	.	.	.	.	A	Y	K	G	L	S	Q	S	D	N	G	Y	G	P	Y	D	L	Y	D	L	G	E	F	Q	Q	K	G	T	V	R	T	K	Y	G	T	K	S	E	L	Q	D	A	I	G	S	L	H	S	R	N	V	Q	V
Template Known Secondary structure																T									.	.	.	.		S			S	S	T	T			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S																T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		129	130	.	.																																																																												.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	D	V	V	L	N	H	K	A	G	A	D	A	T	E	D	V	T	A	V	E	V	N	P	A	N	R	N	Q	E	T	S	E	E	Y	Q	I	K	A	W	T	D	F	R	F	P	G	R	G	N	T	Y	S	D	F	K	W	H	W	Y	H	F	D	G	A	D	W	D	E	S	R	K	I	S	R	I	F	K	F
Template Known Secondary structure								S						S												T	T							S											B			T	T	T	T	T	S	S					B		G	G	G					S		B	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.														.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	F	E	M	P	L	H	L	V	Q	Q	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	T	N	R	K	V	V	D	F	F	V	R	F	A	E	V	V	F	E	R	Y	K
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	E	G	K	A	W	D	W	E	V	S	S	E	N	G	N	Y	D	Y	L	M	Y	A	D	V	D	Y	D	H	P	D	V	V	A	E	T	K	K	W	G	I	W	Y	A	N	E	L	S
Template Known Secondary structure			S	S	S					S	S	S			T	T	S						S	S					T	T																				T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions