Job Description Q46829 Confidence 97.50% Date Thu Jan 5 12:34:51 GMT 2012 Rank 132 Aligned Residues 110 % Identity 18% Template d1b1ya_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		L	P	G	K	Y	Y	P	N	H	E	A	V	D	F	Y	G	H	Y	K	E	D	I	K	L	F	A	E	M	G	F	K	C	F	R	T	S	I	A	W	T	R	I	F	P	K	G	D	E	A	Q	P	N	E	E	G	L	K	F	Y	D	D	M	F	D	E	L	L	K	Y	N	I	E	P	V	I	T	L	.	S	H
Query Conservation																																																																															.
Alig confidence																																																.								.	.	.																					.
Template Conservation																																																.								.	.	.
Template Sequence		L	P	L	D	A	V	S	V	N	N	R	F	E	K	G	D	E	L	R	A	Q	L	R	K	L	V	E	A	G	V	D	G	V	M	V	D	V	W	W	G	L	V	E	G	K	G	.	P	K	A	Y	D	W	S	.	.	.	A	Y	K	Q	L	F	E	L	V	Q	K	A	G	L	K	L	Q	A	I	M	S	F	H
Template Known Secondary structure				T	T	S	S		T	T	S				T														T	T										T	T	T	G	G	G	G	S	.	T	T						.	.	.													T										S
Template Predicted Secondary structure																																																.								.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
													135	.	.	.	.	140	.	.	.	.	.	.																													.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	F	E	M	P	L	H	L	V	Q	Q	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	T	N	R	K	V	V	D	F	F	V	R	F	A	E	V	V	F	E	R	Y	K	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.											.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		Q	C	G	G	N	V	G	D	A	V	N	I	P	I	P	Q	W	V	R	D	V	.	G	T	R	D	P	D	I	F	Y	T	D	G	H	G	T	R	N	I	E	Y	L	T	L	G	V	D	N	Q	P	L	F	H	G	R	S	A	V	Q	M	Y	A	D	Y	M	T	S	F	R	E	N	M	K	D
Template Known Secondary structure			B	S	S	S	T	T			S		B		S								.					G	G	G					T	T										G	G	G	T	T			T	T	T	S
Template Predicted Secondary structure																							.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions