Job Description Q46829 Confidence 100.00% Date Thu Jan 5 12:34:51 GMT 2012 Rank 49 Aligned Residues 292 % Identity 16% Template c3ndyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase d; PDBTitle: the structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans Resolution 2.10 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	D	I	K	L	F	A	E	M	G	F	K	C	F	R	T	S	I	A	W	T	R	I	F	P	K	G	D	E	A	Q	P	N	E	E	G	L	K	F	Y	D	D	M	F	D	E	L	L	K	Y	N	I	E	P	V	I	T	L	S	H	F	E	M	P	L	H	L	V	Q	Q	Y	G	S	W	T	N	R	K	V
Query Conservation
Alig confidence																																																																						.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		H	A	M	I	N	K	I	K	E	A	G	F	N	T	L	R	L	P	V	T	W	D	G	H	M	G	A	A	P	E	Y	T	I	D	Q	T	W	M	K	R	V	E	E	I	A	N	Y	A	F	D	N	D	M	Y	V	I	I	N	L	H	H	E	N	E	W	L	K	P	.	.	.	.	F	Y	A	N	E	A	Q	V
Template Known Secondary structure												T											T	T	S	B			T	T	T			B																	T	T	T									S		T	T	T				.	.	.	.	S	T	T	T
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		V	D	F	F	V	R	F	A	E	V	V	F	E	R	Y	K	H	.	.	K	V	K	Y	W	M	T	F	N	E	I	N	N	Q	R	N	W	R	A	P	L	F	G	Y	C	C	S	G	V	V	Y	T	E	H	E	N	P	E	E	T	M	Y	Q	V	L	H	H	Q	F	V	A	S	A	L	A	V	K	A	A	R	R
Query Conservation																			.	.
Alig confidence																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	Q	L	T	K	V	W	T	Q	I	A	N	N	F	K	K	Y	G	D	H	L	I	F	E	T	M	N	E	P	R	P	V	G	A	S	L	Q	W	T	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	N	R	E	V	V	N	R	Y	N	L	T	A	V	N	A	I	R	A
Template Known Secondary structure																T	T	T			T	T					S		S						S	G	G	G	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	P	E	M	K	V	G	C	M	L	A	M	V	P	L	Y	P	Y	S	C	N	P	D	D	V	M	F	A	Q	E	S	M	R	E	R	Y	V	F	T	D	V	Q	L	R	G	Y	Y	P	S	Y	V	L	N	E	W	E	R	R	G	F	N	I	K	M	E	D	G	D	L	D	V	L	R	E	G	T	C	D	Y
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	G	N	N	A	T	R	Y	I	M	V	P	T	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	M	S	T	T	I	N	D	L	V	I	P	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	K	V	I
Template Known Secondary structure		T		G	G	G	G	T	S							G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						T				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																													.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																.	220	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		L	G	F	S	Y	Y	M	T	N	A	V	K	A	E	G	G	T	G	D	A	I	S	G	F	E	G	S	V	P	N	P	Y	V	K	A	S	D	W	G	W	Q	I	D	P	V	G	L	R	Y	A	L	C	E	L	Y	E	.	.	.	R	Y	Q	R	P	L	F	I	V	E	N	G	F	G	A	Y	D	K	V	E	E
Query Conservation																																																										.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																		.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		V	S	L	H	M	Y	S	P	Y	F	F	A	M	D	I	N	G	T	S	S	W	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	D	K	S	S	L	D	S	E	F	D	A	V	Y	N	K	F	V	K	N	G	R	A	V	V	I	G	E	M	G	S	I	N	K	N	.	.	.	.
Template Known Secondary structure									S					T		T	T	S		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	G	G	G	T													S	S	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.																		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	S	I	N	D	D	Y	R	I	D	Y	L	R	A	H	I	E	E	M	K	K	A	V	T	Y	D	G	V	D	L	M	G	Y	T	P	W	G	C	I	D	C	V	S	F	T	T	G	Q	Y	S	K	R	Y	G	F	I	Y	V	N	K	H	D	D	G	T	G	D	M	S	R	S	R	K	K	S	F	N	W	Y
Query Conservation
Alig confidence		.	.	.	.														.	.	.	.									.	.	.						.	.	.									.									.	.				.	.	.	.	.
Template Conservation		.	.	.	.														.	.	.	.									.	.	.						.	.	.									.									.	.				.	.	.	.	.
Template Sequence		.	.	.	.	N	T	A	A	R	V	T	H	A	E	Y	Y	A	.	.	.	.	K	S	A	K	A	R	G	L	.	.	.	T	P	I	W	W	.	.	.	D	N	G	Y	S	V	A	G	.	K	A	E	T	F	G	I	F	.	.	N	R	S	.	.	.	.	.	N	L	T	W	D	A	P	E	V	M	K	A	F
Template Known Secondary structure		.	.	.	.														.	.	.	.					T	T	T		.	.	.						.	.	.			S				T	T	.	S	T	T						.	.		T	T	.	.	.	.	.	T	T			S	S
Template Predicted Secondary structure		.	.	.	.														.	.	.	.									.	.	.						.	.	.									.									.	.				.	.	.	.	.
Template SS confidence
						283	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.				.	.	.	.	.				.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.			.	.	.						.	.	330	.	.	.	.	.	.	.	.	.	340
		469	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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