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Job DescriptionQ46829
Confidence99.52%DateThu Jan 5 12:34:51 GMT 2012
Rank94Aligned Residues221
% Identity16%Templatec3jugA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-mannanase; PDBTitle: crystal structure of endo-beta-1,4-mannanase from the alkaliphilic2 bacillus sp. n16-5
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  GHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTN
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Template Sequence  DTASTAIPAIAEQGANTIRIVLSD. . . . . . . . GGQWEKDDIDTVREVIELAEQNKMVAVVEVH. . . . . . . . . . DATGRDS
Template Known Secondary structure  GGTT
S

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TTT

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   65....70.........80........ .90.........100.........110......... 120......
 
   151........160......... 170.........180.........190.........200.........210.........220........
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Query Sequence  RKVVDFFVRFAEVVFERYK. . HKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKA
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Template Sequence  RSDLDRAVDYWIEMKDALIGKEDTVIINIANEWYGSWDGAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . WADGYIDVIPK
Template Known Secondary structure  TTT
TTT

TT


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   127..130.........140.........150.........160....... ..170........
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  ARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGT
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Template Sequence  LRDAGLTHTLMVDAAGW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GQYPQSIHDYGQDVFNADP. . . . . . . . . . . LK
Template Known Secondary structure  TT

S

BTT...............................TTBTT
T...........T
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   179180.........190..... ....200.........210.... ..
 
   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  CDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEE
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Template Sequence  NTIFSIHMY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EYAGGDANTVRSNIDRVIDQDLALVIGEFGHRHTDVD. .
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S................................TTTTSSTTT









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   217..220..... ....230.........240.........250.........260..
 
   389390.........400.........410.........420.........430..
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Query Sequence  DGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVS
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Template Sequence  . . . . . . . . . . . . . . . . EDTILSYSEETGT. . . GWLAWSWKGNSA
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G
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   265....270....... ..280.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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