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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank6Aligned Residues453
% Identity28%Templatec3gnoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:os03g0212800 protein; PDBTitle: crystal structure of a rice os3bglu6 beta-glucosidase
Resolution1.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAE
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Template Sequence  LTRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADV. . . . . . . . . . AVDQYHRFEEDIQLMAD
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GGGS
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TTSTT


BTSTTSSTTS


SS..........TT
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   12.......20.........30.........40.........50.........60.... .....70.........80.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  MGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAE
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Template Sequence  MGMDAYRFSIAWSRIYPNG. VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAE
Template Known Secondary structure  TT
S


TTS.SSS

TT
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B
GGGST
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   82.......90.........100 .........110.........120.........130.........140.........150.........160
 
   163......170.........180.........190....... ..200.........210.........220.........230. ...
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Query Sequence  VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCS. . . . . GVVYTEHENPEETMYQVLHHQFVASALAVKAARR. . . INP
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Template Sequence  TCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQ
Template Known Secondary structure  TTT


TS

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TTT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   235....240.........250.........260...... ...270.........280.........290.........300.........310...
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Query Sequence  EMKVGCMLAMVPLYPYSCNPDDVMFAQESMRE. RYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLG
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Template Sequence  NGQLGIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGER. . . LPRFTADEAAVVKGALDFVG
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   241........250.........260.........270.........280.........290....... ..300.........310.......
 
   314.....320.........330.... .....340.........350.........360.........370. ........380
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Query Sequence  FSYYMTNAVKAEGGTGDAISG. . . . . . . . . . . . FEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQR. PLFIVENGF
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Template Sequence  INHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGM
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SSS




TSTTSS
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SSTT
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   318.320.........330.........340.........350.........360.........370.........380.........390.......
 
   381.... ....390.........400.........410.........420.........430.........440.........450........
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Query Sequence  GAYDK. . VEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMS
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Template Sequence  DDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAG. YSSRFGLYFVDYKD. . . . NLK
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TTS
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   398.400.........410.........420.........430.........440.........450..... ....460......... 470..
 
   459460.........470....
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Query Sequence  RSRKKSFNWYKEVIAS
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Template Sequence  RYPKNSVQWFKALLKT
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   473......480........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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