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Job DescriptionQ46829
Confidence53.99%DateThu Jan 5 12:34:51 GMT 2012
Rank254Aligned Residues88
% Identity19%Templatec3edeB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:cyclomaltodextrinase; PDBTitle: structural base for cyclodextrin hydrolysis
Resolution1.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90. ........100.........110.........120.........130.. ...
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Query Sequence  EDIKLFAEMGFKCFRTS. . . . . . . . . . . . . . . . . IAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITL. . SHF
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Template Sequence  DHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPR. . YGS. . . . . NEDFVRLSTEARKRGMGLIQDVVLSHI
Template Known Secondary structure  TTT







SS
GGG

S
S
TT..T

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SB
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   152.......160.........170.........180.........190.... ... ..200.........210.........220....
 
   136...140....... ..150.........160.........
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Query Sequence  EMPLHLVQQYGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WTNRKVVDFFVRFAEVVFERYK
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Template Sequence  GKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAG
Template Known Secondary structure 
TT
GGGGS
SSTTSBGGGGS

B



GGGGS
TT

SBSSTTS
BB
TTST
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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