Job Description Q46829 Confidence 98.19% Date Thu Jan 5 12:34:51 GMT 2012 Rank 121 Aligned Residues 306 % Identity 12% Template c3clwF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from bacteroides2 fragilis Resolution 2.20 Å

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		83	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		M	G	F	K	C	F	R	T	S	I	.	.	.	.	.	.	.	.	A	W	T	R	I	F	P	K	G	D	.	.	.	.	.	.	.	.	E	A	Q	P	N	E	E	G	L	K	F	Y	D	D	M	F	D	E	L	L	K	Y	N	I	E	P	V	I	T	L	S	H	F	E	M	P	L	H	L	V	Q	Q	Y	G
Query Conservation												.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																										.																	.
Template Conservation																																																															.																	.
Template Sequence		M	A	L	T	N	W	R	V	N	I	G	A	G	S	Y	E	N	R	E	A	K	E	V	D	N	S	W	N	R	T	E	C	F	L	S	P	D	G	K	Y	D	F	T	K	Q	A	G	Q	Q	W	F	M	K	A	A	R	E	R	G	M	N	.	N	F	L	F	F	T	N	S	A	P	Y	F	M	T	R	S	.	A
Template Known Secondary structure					S									S	T	T	T	T	T	T	S	S			S	S	S	T	T					S	B		T	T	S		B		T	T	S	S													T	T			.							S	S			G	G	G	S	S	S	.	S
Template Predicted Secondary structure																																																															.																	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.
		147	.										.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		S	W	.	.	.	.	.	.	.	.	.	T	N	R	K	V	V	D	F	F	V	R	F	A	E	V	V	F	E	R	Y	K	H	.	.	.	K	V	K	Y	W	M	T	F	N	E	I	N	N	Q	R	N	W	R	A	P	L	F	G	Y	C	C	S	G	V	V	Y	T	E	H	E	N	P	E	E	T	M	Y	Q	V
Query Conservation				.	.	.	.	.	.	.	.	.																							.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																							.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	V	S	T	D	Q	D	C	I	N	L	Q	N	D	K	F	D	D	F	A	R	F	L	V	K	S	A	Q	H	F	R	E	Q	G	F	H	V	N	Y	I	S	P	N	N	E	P	N	G	Q	W	H	A	N	S	.	.	.	.	.	.	.	.	.	.	F	Q	E	G	S	F	A	T	K	A	D	L	Y	R	M
Template Known Secondary structure		S	S	B		S		S	S	S		S	S		T	T																			T	T										S		T	T	S		G	G	G			.	.	.	.	.	.	.	.	.	.	S	S		B
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.											.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	H	Q	F	V	A	S	A	L	A	V	K	A	A	R	R	I	N	P	E	M	K	V	G	C	M	L	A	M	V	P	L	Y	P	Y	S	C	N	P	D	D	V	M	F	A	Q	E	S	M	R	E	R	Y	V	F	T	D	V	Q	L	R	G	Y	Y	P	S	Y	V	L	N	E	W	E	R	R	G	F	N	I
Query Conservation
Alig confidence					.			.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.			.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	E	.	L	D	.	.	.	.	.	.	K	A	I	S	E	A	Q	I	D	T	K	I	L	I	P	E	V	G	D	M	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	E	I	D	S	I	A	K	T	P	D	D	I	I	H	S	M	F	Y	K	D	G	Q	Y
Template Known Secondary structure					.			.	.	.	.	.	.							T		S									S	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S				S		T	T	S										S	T	T	S	T	T
Template Predicted Secondary structure					.			.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.		.	.							.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		K	M	E	D	G	D	L	D	V	L	R	E	G	T	C	D	Y	L	G	F	S	Y	Y	M	T	N	A	V	K	A	E	G	G	T	G	D	A	I	S	G	F	E	G	S	V	P	N	P	Y	V	K	A	S	D	W	G	W	Q	I	D	P	V	G	L	R	Y	A	L	C	E	L	Y	E	R	.	.	.	.	.	Y
Query Conservation																																																																												.	.	.	.	.
Alig confidence							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	L	K	F	.	.	.	.	.	.	K	N	L	F	N	C	V	A	A	H	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	A	Y	P	A	T	L	L	V	D	I	R	N	R	I	H	K	E	L	S	A	N	G	H
Template Known Secondary structure				T	T		.	.	.	.	.	.	T	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S	S	S																	T	T	S	S
Template Predicted Secondary structure							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.																																	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	P	L	F	I	V	E	N	G	F	G	A	Y	D	K	V	E	E	D	G	S	I	N	D	D	Y	R	I	D	Y	L	R	A	H	I	E	E	M	K	K	A	V	T	Y	D	G	V	D	L	M	G	Y	T	P	W	G	C	I	D	C	V	S	F	T	T	G	Q	Y	S	K	R	Y	G	F	I	Y	V	N	K
Query Conservation
Alig confidence																									.																						.	.
Template Conservation																									.																						.	.
Template Sequence		N	T	K	F	W	A	S	E	Y	C	I	L	E	K	N	E	E	I	T	M	P	A	S	.	P	E	R	S	I	N	L	G	L	Y	V	A	R	I	I	H	N	D	L	T	L	.	.	A	N	A	S	A	W	Q	W	W	T	A	V	S	L	G	E	D	V	P	I	Q	L	L	P	L	E	G	S	N	G	L	S	L
Template Known Secondary structure																	T	T	T		S	S	S		.																					T	.	.	S			S							S			S	S	S	S	S	S							T	T			S	G	G	G
Template Predicted Secondary structure																									.																						.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	D	G	T	G	D	M	S	R	S	R	K	K	S	F	N	W	Y	K	E	V	I	A
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		Q	Y	.	.	.	.	D	G	E	I	S	T	T	K	M	L	W	T	T	A	N	Y	S	F
Template Known Secondary structure		G	T	.	.	.	.																		T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		405	.					.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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