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Job DescriptionQ46829
Confidence36.61%DateThu Jan 5 12:34:51 GMT 2012
Rank293Aligned Residues104
% Identity8%Templatec3amlA_
PDB info PDB header:transferaseChain: A: PDB Molecule:os06g0726400 protein; PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YPNHEAVDFYGHYKED. IKLFAEMGFKCFRT. SI. . . . . . . AW. . . . . TRIFPKGDEAQPNEEGLKFYDDMFDELLKYNI
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Template Sequence  SGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGT. . . . . PEDLKYLVDKAHSLGL
Template Known Secondary structure 
SSSSS


TTT

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GGGTT
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   191........200.........210.........220.........230.........240......... 250.........260.....
 
   127..130.. .......140...... ...150.........160.........
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Query Sequence  EPVITL. . . . . . . . . . . . . . . . . . . . . . . . . SHFEMPLHLVQQYG. . . . SWTNRKVVDFFVRFAEVVFERYK
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Template Sequence  RVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFM
Template Known Secondary structure 

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TTTSGGGG
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   266...270.........280.........290.........300.........310.........320.........330.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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