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Job Description | Q46829 | Confidence | 36.61% | Date | Thu Jan 5 12:34:51 GMT 2012 |
Rank | 293 | Aligned Residues | 104 |
% Identity | 8% | Template | c3amlA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:os06g0726400 protein; |
PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l
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Resolution | 1.70 Å |
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61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | P | N | H | E | A | V | D | F | Y | G | H | Y | K | E | D | . |
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T | R | I | F | P | K | G | D | E | A | Q | P | N | E | E | G | L | K | F | Y | D | D | M | F | D | E | L | L | K | Y | N | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | G | E | E | P | E | V | S | T | Y | R | E | F | A | D | N | V | L | P | R | I | R | A | N | N | Y | N | T | V | Q | L | M | A | I | M | E | H | S | Y | Y | A | S | F | G | Y | H | V | T | N | F | F | A | V | S | S | R | S | G | T | . |
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P | E | D | L | K | Y | L | V | D | K | A | H | S | L | G | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
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250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
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127 | . | . | 130 | . | . | |
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. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | P | V | I | T | L | . |
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S | H | F | E | M | P | L | H | L | V | Q | Q | Y | G | . |
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S | W | T | N | R | K | V | V | D | F | F | V | R | F | A | E | V | V | F | E | R | Y | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | V | L | M | D | V | V | H | S | H | A | S | N | N | V | T | D | G | L | N | G | Y | D | V | G | Q | N | T | H | E | S | Y | F | H | T | G | D | R | G | Y | H | K | L | W | D | S | R | L | F | N | Y | A | N | W | E | V | L | R | F | L | L | S | N | L | R | Y | W | M | D | E | F | M |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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