Job Description Q46829 Confidence 75.00% Date Thu Jan 5 12:34:51 GMT 2012 Rank 221 Aligned Residues 102 % Identity 10% Template c3amkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:os06g0726400 protein; PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l Resolution 1.90 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	P	N	H	E	A	V	D	F	Y	G	H	Y	K	E	D	.	I	K	L	F	A	E	M	G	F	K	C	F	R	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	W	T	R	I	F	P	K	G	D	E	A	Q	P	N	E	E	G	L	K	F	Y	D	D	M	F	D	E	L	L	K	Y
Query Conservation																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.							.	.	.	.	.
Template Conservation																																																										.	.							.	.	.	.	.
Template Sequence		S	G	E	E	P	E	V	S	T	Y	R	E	F	A	D	N	V	L	P	R	I	R	A	N	N	Y	N	T	V	Q	L	M	A	I	M	E	H	S	Y	Y	A	S	F	G	Y	H	V	T	N	F	F	A	V	S	S	R	.	.	S	G	T	P	E	D	.	.	.	.	.	L	K	Y	L	V	D	K	A	H	S	L
Template Known Secondary structure			S	S	S	S	S											T							T	T								S					S		G	G	G	T	T		S		S							G	G	.	.	G						.	.	.	.	.											T
Template Predicted Secondary structure																																																										.	.							.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.
		125	.	.	.	.	130	.	.																										.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		N	I	E	P	V	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	F	E	M	P	L	H	L	V	Q	Q	Y	G	.	.	.	.	S	W	T	N	R	K	V	V	D	F	F	V	R	F	A	E	V	V	F	E	R	Y	K
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		G	L	R	V	L	M	D	V	V	H	S	H	A	S	N	N	V	T	D	G	L	N	G	Y	D	V	G	Q	N	T	H	E	S	Y	F	H	T	G	D	R	G	Y	H	K	L	W	D	S	R	L	F	N	Y	A	N	W	E	V	L	R	F	L	L	S	N	L	R	Y	W	M	D	E	F	M
Template Known Secondary structure		T										S						T	T	T	S	G	G	G	G		S	S			G	G	G	S	S	B			G	G	G	G			T	T	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions