|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | L | P | K | D | F | L | W | G | G | A | V | A | A | H | Q | V | E | G | G | W | N | K | G | G | K | G | P | S | I | C | D | V | L | T | G | G | . |
A | H | G | V | P | R | E | I | T | K | E | V | L | P | G | K | Y | Y | P | N | H | E | A | V | D | F | Y | G | H | Y | K | E | D | I | K | L | F | A | E | M | G |
Query Conservation |   |
  |   |
|
|   |   |
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |   |
|
|
|
|   |
|
|
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |
|
|   |
|
|
|   |
|   |   |
|
|
|
Template Sequence |   |
Y | T | F | P | D | E | F | K | L | G | A | A | T | A | S | Y | Q | I | E | G | A | W | D | E | N | G | K | G | P | N | I | W | D | T | L | T | H | E | H | P | D | Y | V | V | D | G | A | T | G | D | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | D | D | S | Y | H | L | Y | K | E | D | V | K | I | L | K | E | L | G |
Template Known Secondary structure |   |
T | B |
|
| T | T |
|  |  |  |  |  |
|
|  |  |  |  |
|
|
| T | T | G | G | G |
|
|
| B |  |  |  |  |  |  |  |  |
| G | G | G | S | G | G | G |
|
| S | S | S | . | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | K | C | F | R | T | S | I | A | W | T | R | I | F | P | K | G | D | E | A | Q | P | N | E | E | G | L | K | F | Y | D | D | M | F | D | E | L | L | K | Y | N | I | E | P | V | I | T | L | S | H | F | E | M | P | L | H | L | V | Q | Q | Y | G | S | W | T | N | R | K | V | V | D | F | F | V | R | F | A | E | V | V |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|
|
|   |
|   |   |
| . |   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
A | Q | V | Y | R | F | S | I | S | W | A | R | V | L | P | E | G | H | D | N | I | V | N | Q | D | G | I | D | Y | Y | N | N | L | I | N | E | L | L | A | N | G | I | E | P | M | V | T | M | Y | H | W | D | L | P | Q | A | L | . |
Q | D | L | G | G | W | P | N | L | V | L | A | K | Y | S | E | N | Y | A | R | V | L |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
|
|  |  |  |  | S | T | T | S | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  | S | S |
|
| B |  |  |  | . |  | T | T | T | S | T | T | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | |
|
|
. | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
F | E | R | Y | K | H | K | V | K | Y | W | M | T | F | N | E | I | N | N | Q | R | N | W | R | A | P | L | F | G | Y | C | C | S | G | V | V | Y | T | E | H | E | N | P | E | E | T | M | Y | Q | V | L | H | H | Q | F | V | A | S | A | L | A | V | K | A | A | R | R | I | N | . |
. |
. |
P | E | M | K | V | G | C | M |
Query Conservation |   |
  |   |   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |
|   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
F | K | N | F | G | D | R | V | K | L | W | L | T | F | N | D | P | L | T | F | M | D | G | Y | A | S | E | I | G | M | . |
. |
. |
. |
. |
. |
A | P | S | I | N | T | P | G | I | G | D | Y | L | A | A | H | T | V | I | H | A | H | A | R | I | Y | H | L | Y | D | Q | E | F | R | A | E | Q | G | G | K | V | G | I | S |
Template Known Secondary structure |   |
 |  |  |  | T | T | T |
|
|  |  |  |  |  |  |
|  |  |  |  | G | G | G | G | B |
| T | T | S | S | . | . | . | . | . | . | T | T |
|
| B |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
  |
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | |
|
. | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | M | V | P | L | Y | P | Y | S | C | N | P | D | D | V | M | F | A | Q | E | S | M | R | E | R | Y | . |
V | F | T | D | V | Q | L | . |
. |
R | G | Y | Y | P | S | Y | V | L | N | E | W | E | R | R | G | F | . |
. |
. |
. |
. |
. |
. |
N | I | K | M | E | D | G | D | L | D | V | L | R | E | G | T | C | D | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |   | . | . |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
L | N | I | N | W | C | E | P | A | T | N | S | A | E | D | R | A | S | C | E | N | Y | Q | Q | F | N | L | G | L | Y | A | H | P | I | F | T | E | E | G | D | Y | P | A | V | L | K | D | R | V | S | R | N | S | A | D | E | G | Y | T | D | S | R | L | P | Q | F | T | A | E | E | V | E | Y | I | R | G | T | H | D | F |
Template Known Secondary structure |   |
 |  |
|
|  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  | S | S | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
| S | S |
|
|
|
|  |  |  |  |  |  |  | T | T |
|
| S |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
  |   |
312 | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | |
|
|
. | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | |
. | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | F | S | Y | Y | M | T | N | A | V | K | A | E | G | G | T | G | D | A | I | . |
. |
. |
S | G | F | E | G | S | V | P | N | P | Y | V | K | A | S | D | W | G | W | . |
Q | I | D | P | V | G | L | R | Y | A | L | C | E | L | Y | E | R | Y | . |
Q | R | P | L | F | I | V | E | N | G | F | G | A | Y | D | K | V |
Query Conservation |   |
  |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| . |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
| . |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|   |   |   |   | . | . | . |
Template Sequence |   |
L | G | I | N | F | Y | T | A | L | L | G | K | S | G | V | E | G | Y | E | P | S | R | Y | R | D | S | G | V | I | L | T | Q | D | A | A | W | P | I | S | A | S | S | W | L | K | V | V | P | W | G | F | R | K | E | L | N | W | I | K | N | E | Y | N | N | P | P | V | F | I | T | E | N | G | F | S | D | Y | . |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  | S | S |
|
| S |
| S | S |
|  |  |  |  |  | T |
|  |  |  |
|
| T | T | S |
|
|
| S | S | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |  |
|
|
|
| B | S | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
332 | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | |
|
|
  |
  |   |
387 | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | D | G | S | I | N | D | D | Y | R | I | D | Y | L | R | A | H | I | E | E | M | K | K | A | V | T | Y | D | G | V | D | L | M | G | Y | T | P | W | G | C | I | D | C | V | S | F | T | T | G | Q | Y | S | K | R | Y | G | F | I | Y | V | N | K | H | D | D | G | T | G | D | M | S | R | S | R | K | K | S | F | N |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |
|   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |
| . |
|   |   |
|
|
|
|   |   |
|
|   |   |
|   | . | . | . |   |   |   |
|   |   |
|   |
|
|   |
Template Sequence |   |
. |
. |
. |
G | G | L | N | D | T | G | R | V | H | Y | Y | T | E | H | L | K | E | M | L | K | A | I | H | E | D | G | V | N | V | I | G | Y | T | A | W | S | L | M | D | N | F | E | W | L | R | G | . |
Y | S | E | K | F | G | I | Y | A | V | D | F | E | D | P | . |
. |
. |
A | R | P | R | I | P | K | E | S | A | K |
Template Known Secondary structure |   |
. | . | . | S |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |
| S | B |
|
|
|
| G | G | G | T | . | T | S | S | B |
|
| S |  |  |  |
| T | T | S | T | . | . | . | T |
|
|  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |
|
|  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
409 | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | |
. | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | |
|
|
. | . | . | . | . | . | . | . | . | 480 | . |
  |
  |   |
467 | . | . | 470 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | Y | K | E | V | I | A | S | N | G | E | K |
Query Conservation |   |
  |
|   |   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
V | L | A | E | I | M | N | T | R | K | I | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | B |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
482 | . | . | . | . | . | . | . | 490 | . | . | . |
  |