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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank21Aligned Residues446
% Identity29%Templatec3ai0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of beta-glucosidase from termite neotermes2 koshunensis in complex with para-nitrophenyl-beta-d-glucopyranoside
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40... ......50.........60.........70.........80....
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Query Sequence  LTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGG. AHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMG
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Template Sequence  YTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDI. . . . . . . . . . ADDSYHLYKEDVKILKELG
Template Known Secondary structure  TB

TT





TTGGG


B
GGGSGGG

SSS..........TT
T
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   2930.........40.........50.........60.........70......... 80.........90........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  FKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVV
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Template Sequence  AQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQAL. QDLGGWPNLVLAKYSENYARVL
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STTSSTT


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B.TTTSTTST
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   99100.........110.........120.........130.........140.........150..... ....160.........170.......
 
   165....170.........180.........190.........200.........210.........220.........230... ......240.
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Query Sequence  FERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRIN. . . PEMKVGCM
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Template Sequence  FKNFGDRVKLWLTFNDPLTFMDGYASEIGM. . . . . . APSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGIS
Template Known Secondary structure  TTT


GGGGB
TTSS......TT

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   178.180.........190.........200....... ..210.........220.........230.........240.........250.
 
   242.......250.........260........ .270..... ....280.........290.. .......300.........310.
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Query Sequence  LAMVPLYPYSCNPDDVMFAQESMRERY. VFTDVQL. . RGYYPSYVLNEWERRGF. . . . . . . NIKMEDGDLDVLREGTCDY
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Template Sequence  LNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDF
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SSSSTSSS
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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   312.......320.........330.. .......340.........350. ........360......... 370.........380......
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Query Sequence  LGFSYYMTNAVKAEGGTGDAI. . . SGFEGSVPNPYVKASDWGW. QIDPVGLRYALCELYERY. QRPLFIVENGFGAYDKV
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Template Sequence  LGINFYTALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDY. . .
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SSTT



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BS...
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   332.......340.........350.........360.........370.........380.........390.........400........
 
   387..390.........400.........410.........420.........430.........440.........450.........460......
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Query Sequence  EEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFN
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Template Sequence  . . . GGLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRG. YSEKFGIYAVDFEDP. . . ARPRIPKESAK
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   409410.........420.........430.........440.........450..... ....460.........470 .........480.
 
   467..470........
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Query Sequence  WYKEVIASNGEK
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Template Sequence  VLAEIMNTRKIP
Template Known Secondary structure  TB

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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