 |
Job Description | Q46829 | Confidence | 33.81% | Date | Thu Jan 5 12:34:51 GMT 2012 |
Rank | 299 | Aligned Residues | 77 |
% Identity | 14% | Template | c2zq0B_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:alpha-glucosidase (alpha-glucosidase susb); |
PDBTitle: crystal structure of susb complexed with acarbose
|
Resolution | 1.60 Å |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | E | D | I | K | L | F | A | E | M | G | F | K | C | F | R | T | S | I | A | W | T | R | I | F | P | K | G | D | E | A | Q | P | N | E | E | G | L | K | F | Y | D | D | M | F | D | E | L | L | K | Y | N | I | E | P | V | I | T | L | S | H | F | E | M | P | L | H | L | V | Q | Q | Y | G | S | W | T | N | R | K | V |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   | . |   |   |   |   |   |   |   | . |   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
| . | . |
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|   |
|
|   |
|
|
Template Sequence |   |
D | K | A | Y | Q | F | M | A | D | N | G | Y | N | S | V | K | S | G | Y | V | . |
G | N | I | I | P | R | G | . |
E | H | H | Y | G | Q | W | M | N | N | H | Y | L | Y | A | V | K | K | A | A | D | Y | K | I | . |
. |
M | V | N | A | H | E | A | T | R | P | T | G | I | C | R | T | Y | P | N | L | I | G | N | E | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
| . | S | S |
| B | S | T | T | . |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . |  |  |  |  | T | T | S |
|
|
|
| S | G | G | G | T |
| T | T |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
452 | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | |
. | . | . | . | . | . | . | |
. | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | |
|
. | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . |
  |
  |   |
154 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
V |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
A |
Template Known Secondary structure |   |
S |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
528 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|