Return to main results Retrieve Phyre Job Id

Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank27Aligned Residues447
% Identity29%Templatec2zoxA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytosolic beta-glucosidase; PDBTitle: crystal structure of the covalent intermediate of human cytosolic2 beta-glucosidase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40..... ....50.........60.........70.........80....
Predicted Secondary structure 


























.
























Query SS confidence 







































.






































Query Sequence  LTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAH. GVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMG
Query Conservation    

  



 



 




   



 



       .                    
 
 
  
 


 

  

Alig confidence 







































.









..........


















Template Conservation    

  



 



 
 


   


  
 

                  ..........
 
 
 

 


 
   

Template Sequence  MAFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDV. . . . . . . . . . ACGSYTLWEEDLKCIKQLG
Template Known Secondary structure 
B

TT





TTGGG


BT
TTSSGGG

SSS..........TT
TTT
T
Template Predicted Secondary structure 


































..........





Template SS confidence 















































































   1........10.........20.........30.........40.........50. ........60.........70
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  FKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVV
Query Conservation     









 
 
  
  
  

  
  


 
   

 




 




  
    


 
   
  
  

   
Alig confidence 



























































.


















Template Conservation     




 



 
 
  
  
   
  
   

 
   

 




 


 
  
   .


     
  
  

   
Template Sequence  LTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ. GGWLSEAIIESFDKYAQFC
Template Known Secondary structure 
S

STTSSTTS

TT
SS

BT.TGGGST
Template Predicted Secondary structure 
























.




Template SS confidence 















































































   71........80.........90.........100.........110.........120.........130 .........140.........
 
   165....170.........180.........190.........200.........210.........220.........230....... ..240.
Predicted Secondary structure 
































...
Query SS confidence 








































































. . .



Query Sequence  FERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMK. . . VGCM
Query Conservation     




  
 




                
   
                
 


 
            ...


 
Alig confidence 


























......







































...



Template Conservation      

 
  
 
 


       
  ......
  

                
 


 
             
 
 
 
Template Sequence  FSTFGDRVKQWITINQANVLSVMSYDL. . . . . . GMFPPGIPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLS
Template Known Secondary structure  TTT

TTTS......

STT



TTTT


Template Predicted Secondary structure 













......
















Template SS confidence 















































































   150.........160.........170...... ...180.........190.........200.........210.........220...
 
   242.......250.. .......260...... ...270.... .....280.........290 .........300.........310.
Predicted Secondary structure 





.
.






.




.......













Query SS confidence 










.













.







.















. . . . . . .




















Query Sequence  LAMVPLYPYSC. NPDDVMFAQESMRE. RYVFTDVQ. LRGYYPSYVLNEWERR. . . . . . . GFNIKMEDGDLDVLREGTCDY
Query Conservation         
   .   
  

      .     
  .  
 

          .......                   

Alig confidence 










.













.







.















.......




















Template Conservation         
       
  

             

   
 

                    

     
        

Template Sequence  LFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADF
Template Known Secondary structure  SSTT
TTTSS

TT
SS
SS



TT

SS
Template Predicted Secondary structure 







































Template SS confidence 















































































   224.....230.........240.........250.........260.........270.........280.........290.........300...
 
   312.......320.........330..... ....340.........350.........360.........370.. .......380......
Predicted Secondary structure 

















....



















.









Query SS confidence 























. . . .




































.













Query Sequence  LGFSYYMTNAVKAEGGTGDAISGF. . . . EGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRP. LFIVENGFGAYDKV
Query Conservation   




    
             ....              

 
 
 

   
      
  
.
 




       
Alig confidence 























....















.



















.











..
Template Conservation 





    
                                 .
 
 

   
      
  
 
 




    
..
Template Sequence  FAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNVDWIY. VVPWGVCKLLKYIKDTYNNPVIYITENGFPQSD. .
Template Known Secondary structure 


TT


ST

TTS
TT.

TTTS





S..
Template Predicted Secondary structure 



































.











..
Template SS confidence 















































































   304.....310.........320.........330.........340....... ..350.........360.........370.........380
 
   387..390.........400.........410.........420.........430.........440.........450.........460......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  EEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFN
Query Conservation       
 
  

 

   
  
  

  


 
 

  


 

 

  
 
  



  

  
       
 

 

 
Alig confidence  ..















































.














...










Template Conservation  ..   
 
  

 

  

     

  


 
 

  


 

 

  
.
  



  

    ...   
 

 

 
Template Sequence  . . PAPLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQG. YSSRFGLFHVDFEDP. . . ARPRVPYTSAK
Template Known Secondary structure  ..S

SS
TS



SB



GGGG.GG

S
TTST...T


Template Predicted Secondary structure  ..













.









...



Template SS confidence 















































































   381........390.........400.........410.........420........ .430.........440... ......450....
 
   467..470........
Predicted Secondary structure 



Query SS confidence 











Query Sequence  WYKEVIASNGEK
Query Conservation   
  

  

  
Alig confidence 











Template Conservation   
  

  

 
Template Sequence  EYAKIIRNNGLE
Template Known Secondary structure  TB

Template Predicted Secondary structure 



Template SS confidence 











   455....460......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions