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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank13Aligned Residues442
% Identity27%Templatec2z1sA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase b; PDBTitle: beta-glucosidase b from paenibacillus polymyxa complexed2 with cellotetraose
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEM
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Template Sequence  NTFIFPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDV. . . . . . . . . . ACDHFHHFKEDVQLMKQL
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TT





TTSTT


BTTSTTSSGGG

SSS..........TT
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   4.....10.........20.........30.........40.........50..... ....60.........70...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  GFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEV
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Template Sequence  GFLHYRFSVAWPRIMPAA. . GIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDE. GGWTQRETIQHFKTYASV
Template Known Secondary structure  T
S


SST..T


T
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BT.TGGGST
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   74.....80.........90. ........100.........110.........120.........130.. .......140.........150
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  VFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLA
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Template Sequence  IMDRFGERINWWNTINEPYCASILGYGTGEHA. . . . . . . PGHENWREAFTAAHHILMCHGIASNLHKEKGLTGKIGITLN
Template Known Secondary structure  SSSS
S
TSS
ST.......T



TT

S
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   151........160.........170.........180.. .......190.........200.........210.........220...
 
   244.....250.........260...... ...270.........280.........290.........300.........310.........320..
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Query Sequence  MVPLYPYSCNPDDVMFAQESMRE. RYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAV
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Template Sequence  MEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSII
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SSS
TSS

GGGGGGGTT

TT


TT




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   224.....230.........240.........250.........260.........270.........280.........290.........300...
 
   323......330.........340.........350.........360.........370. ........380.........390.........400
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Query Sequence  KAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQR. . PLFIVENGFGAYDKVEEDGSINDDYRIDY
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Template Sequence  RSTNDASLLQ. . . . VEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSKGLPILITENGAAMRDEL. VNGQIEDTGRQRY
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SSSSS
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SSB
TTS
B

TTTTTS







.TT

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   304.....310... ......320.........330.........340.........350.........360..... ....370........
 
   401........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  LRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGE
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Template Sequence  IEEHLKACHRFIE. EGGQLKGYFVWSFLDNFEWAWG. YSKRFGIVHINYE. . . . . TQERTPKQSALWFKQMMAKNGF
Template Known Secondary structure  TT.TT


SB



GGGG.GG



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TT.....T


TT

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   379380.........390. ........400.........410... ......420...... ...430.........440........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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