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Job DescriptionQ46829
Confidence46.57%DateThu Jan 5 12:34:51 GMT 2012
Rank277Aligned Residues93
% Identity14%Templatec2x4bA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:limit dextrinase; PDBTitle: barley limit dextrinase in complex with beta-cyclodextrin
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   77..80.........90 .........100....
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Query Sequence  IKLFAEMGFKCFRT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SIAWTRIFPKGDEA
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Template Sequence  LRKLSDAGLTHVHLLPSFHFAGVDDIKSNWKFVDECELATFPPGSDMQQAAVVAIQEEDPYNWGYNPVLWGVPKGSYASD
Template Known Secondary structure  T




SSS
S
GGG




TTS
TT
STTSSS






GGGSS
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   293......300.........310.........320.........330.........340.........350.........360.........370..
 
   105....110.........120.........130.. .......140....... ..150.....
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Query Sequence  QPNEEGLKFYDDMFDELLKYNIEPVITL. . . . . . . . . . . . . . . . . . . . . . . . SHFEMPLHLVQQYGS. . . . . WTNRKVVD
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Template Sequence  PDGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMNNTASEHFMVDR
Template Known Secondary structure  SSSTTT


SB
S

SS
STT

STTTSB
B
TTS
B

TTSSSBB
TTS
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   373......380.........390.........400.........410.........420.........430.........440.........450..
 
   156...160.........
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Query Sequence  FFVRFAEVVFERYK
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Template Sequence  LIVDDLLNWAVNYK
Template Known Secondary structure  S
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   453......460......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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