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Job DescriptionQ46829
Confidence76.58%DateThu Jan 5 12:34:51 GMT 2012
Rank214Aligned Residues91
% Identity24%Templatec2wcsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100..... ....110.........120.........130.. .......140.
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Query Sequence  KEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQ. . . . . . . . . . PNEEGLKFYDDMFDELLKYNIEPVITL. . SHFEMPLHL
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Template Sequence  MEDLDYIQNLGINAIYFTP. . . . IFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFF
Template Known Secondary structure  TT

S
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STT
TTS
GGGTTT


SB

TTS
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   5960.........70....... ..80.........90.........100.........110.........120.........130....
 
   142.... ...150.........160.........
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Query Sequence  VQQYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SWTNRKVVDFFVRFAEVVFERYK
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Template Sequence  FHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL. KFG
Template Known Secondary structure  GGG
TTGGGB
B
SSS

SS

SS

SB
BGGG
TTSBBB
TTS.T
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   135....140.........150.........160.........170.........180.........190.........200 ...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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