Job Description Q46829 Confidence 77.30% Date Thu Jan 5 12:34:51 GMT 2012 Rank 212 Aligned Residues 121 % Identity 17% Template c2vcbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase; PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac Resolution 2.20 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	H	Y	K	E	D	I	K	L	F	A	E	M	G	F	K	C	F	R	T	S	I	A	W	T	R	I	F	P	K	G	D	E	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	D	Q	Y	E	E	F	L	D	W	C	A	M	N	G	V	N	.	.	.	.	.	.	.	.	.	.	.	L	V	L	D	I	I	G	Q	E	E	V	L	R	R	T	L	N	E	F	G	Y	S	D	E	E	V	K	E	F	I	S	G	P	A	Y	F	A	W	F	Y	M	Q	N	M	T	G	F	G	G	P	L	P
Template Known Secondary structure															T	T			.	.	.	.	.	.	.	.	.	.	.						T	T										G	G	G	T										S			T	T							T	T	S			S	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.												.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
						106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.																	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																									.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																									.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	P	N	E	E	G	L	K	F	Y	D	D	M	F	D	E	L	L	K	Y	N	I	E	P	V	I	T	L	S	H	F	E	M	P	L	H	L	V	Q	Q	Y	.	.	.	.	.	.	.	.	G	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	R	K	V	V	D	F	F
Query Conservation		.	.	.	.																																									.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.								.	.																																.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		N	D	W	F	E	Q	R	A	E	L	G	.	.	R	K	M	H	D	R	M	Q	S	F	G	I	N	P	V	L	Q	G	Y	S	G	M	V	P	R	D	F	K	E	K	N	Q	E	A	Q	T	I	S	Q	G	G	W	C	G	F	D	R	P	D	M	L	K	T	Y	V	N	E	G	E	A	D	Y	F	Q	K	V	A
Template Known Secondary structure		T	T										.	.											T									S					T	T					S	T	T										T	T									S	S			T	T	S
Template Predicted Secondary structure													.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		V	R	F	A	E	V	V	F	E	R	Y	K	H	K	V	K	Y	W	M	.	.	T	F	N	E	I	N	N	Q	R	N	W	R	A	P	L	F	G	Y	C	C	S	G	V	V	Y	T	E	H	E	N	P	E	E	T	M	Y	Q	V	L	H	H	Q	F	V	A	S
Query Conservation																					.	.
Alig confidence																					.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	F	Y	E	K	Q	K	E	V	F	G	D	V	T	N	F	Y	G	V	D	P	F	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	T	G	D	L	D	N	G	K	I	Y	E	I	I	Q	N	K	M	I	E	H
Template Known Secondary structure														S			S						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.																				.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions