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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank16Aligned Residues452
% Identity31%Templatec2jf7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:strictosidine-o-beta-d-glucosidase; PDBTitle: structure of strictosidine glucosidase
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.........70.........80
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Query Sequence  IVKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGG. AHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLF
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Template Sequence  VVHRRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQ. . . . . . . . . . AINCYHMYKEDIKIM
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GGGS
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TTSTT


B
GGGSTTS

SSS..........TT
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   37..40.........50.........60.........70.........80.........90. ........100......
 
   81........90.........100.. .......110.........120.........130.........140.........150.........
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Query Sequence  AEMGFKCFRTSIAWTRIFPKGD. EAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVR
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Template Sequence  KQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFCE
Template Known Secondary structure  T
S

STTSSSTT


TT
SS

B
GGGSTT
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   160.........170.........180.........190.........200.........210.........220.........230. .....
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Query Sequence  FAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARR. . . INPEM
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Template Sequence  YAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGRGGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEG
Template Known Secondary structure  GGG
S
TT

STT

SSTT
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TTTT

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   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   237..240.........250.........260...... ...270.........280.........290.........300.........310.....
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Query Sequence  KVGCMLAMVPLYPYSCNPDDVMFAQESMRE. RYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFS
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Template Sequence  EIGIVLNSMWMEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGR. . . LPKFSADDSEKLKGCYDFIGMN
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SSSSTTSS

GGG...S



TT

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   267..270.........280.........290.........300.........310.........320. ........330.........340...
 
   316...320.........330..... ....340.........350.. .......360.........370.. .......380....... .
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Query Sequence  YYMTNAVKAEGGTGDAISGF. . . EGSVPNPYVKASDWGWQ. IDPVGLRYALCELYERYQRP. LFIVENGFGAYDKVE. . E
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Template Sequence  YYTATYVTNAVLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILL
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S
SBSSS
BSS
TTSS



S





TTS
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   344.....350.........360.........370.........380.........390.........400.........410.........420...
 
   389390.........400.........410.........420.........430.........440.........450.........460........
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Query Sequence  DGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWY
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Template Sequence  SEARRDAERTDYHQKHLASVRDAID. DGVNVKGYFVWSFFDNFEWNLG. YICRYGIIHVDYK. . . . . SFERYPKESAIWY
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.TT


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GGGT.TS

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   430.........440.........450.... .....460.........470...... ...480......... 490.........500..
 
   469470...
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Query Sequence  KEVIA
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Template Sequence  KNFIA
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   503....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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