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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank18Aligned Residues437
% Identity33%Templatec2j75A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase a; PDBTitle: beta-glucosidase from thermotoga maritima in complex with2 noeuromycin
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAE
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Template Sequence  VK. . KFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDV. . . . . . . . . . ACDHYNRWKEDIEIIEK
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TT





TTGGG


BTSTTSSGGG

SSS..........TT
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   3. .....10.........20.........30.........40.........50... ......60.........70
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  MGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAE
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Template Sequence  LGVKAYRFSISWPRILPEG. TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK. GGWANREIADWFAEYSR
Template Known Secondary structure  TT



STTS.SS


TT
SS

BTT.TGGGSTT
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   71........80......... 90.........100.........110.........120.........130. ........140........
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCML
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Template Sequence  VLFENFGDRVKNWITLNEPWVVAIVGHLYGVHA. . . . . . . PGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVF
Template Known Secondary structure  TTT


TS
SST.......T




TT
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   149150.........160.........170.........180. ........190.........200.........210.........220.
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  AMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAV
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Template Sequence  NNGYFEPASEDIRAVRFMHQFNNY. PLFLNPIYRGDYPELVLEFAREY. . . LPENYKDDMSEIQEKIDFVGLNYYSGHLV
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S


ST.SS

GGG...S
TTGGGGT


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   222.......230.........240..... ....250.........260........ .270.........280.........290.......
 
   323......330.........340.........350.........360.........370.. .......380.........390.........400.
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Query Sequence  KAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRP. LFIVENGFGAYDKVEEDGSINDDYRIDYL
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Template Sequence  KFDAPAKVSFV. . . . . . . ERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYL
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TTS.......

SS
B
TT

B

T

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   301........310. ........320.........330.........340.........350.........360.........370...
 
   402.......410.........420.........430.........440.........450.........460.........470........
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Query Sequence  RAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGEK
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Template Sequence  KAHIGQAWKAIQ. EGVPLKGYFVWSLLDNFEWAEG. YSKRFGIVYVDYS. . . . . TQKRIVKDSGYWYSNVVKNNGLE
Template Known Secondary structure  .TT


SB



GGGG.GG



STT.....TT
TT
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   376...380....... ..390.........400......... 410.........420.. .......430.........440.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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