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Job DescriptionQ46829
Confidence100.00%DateThu Jan 5 12:34:51 GMT 2012
Rank7Aligned Residues453
% Identity31%Templatec2dgaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of hexameric beta-glucosidase in wheat
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.........70.........80
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Query Sequence  IVKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGG. AHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLF
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Template Sequence  IPKRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDV. . . . . . . . . . AANSYHLYEEDVKAL
Template Known Secondary structure  S

GGGS
TT





TTSTT


B
GGGSTTS

TTT..........TT
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   23......30.........40.........50.........60.........70....... ..80.........90..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRF
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Template Sequence  KDMGMKVYRFSISWSRILPDG. TGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQF
Template Known Secondary structure  T
S


TTS.SSS

TT
SS

B
GGGST
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   93......100.........110... ......120.........130.........140.........150.........160.........170.
 
   161........170.........180.........190......... 200.........210.........220.........230. .
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Query Sequence  AEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGV. . . . . VYTEHENPEETMYQVLHHQFVASALAVKAARR. . . I
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Template Sequence  AEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNM
Template Known Secondary structure  TTT


TS

STT
B

TTSSSSB

S
TTTS
T
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   233......240.........250.........260...... ...270.........280.........290.........300.........310.
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Query Sequence  NPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRE. RYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDY
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Template Sequence  HGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDR. . . LPMFTKEEQEKLASSCDI
Template Known Secondary structure  TS

SSSSTSS

GGG...S



TT

S
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   252.......260.........270.........280.........290.........300.........310 .........320........
 
   312.......320.........330..... ....340.........350. ........360......... 370........
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Query Sequence  LGFSYYMTNAVKAEGGTGDAISGF. . . . . . . . . . . EGSVPNPYVKASDWGW. QIDPVGLRYALCELYERY. QRPLFIVEN
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Template Sequence  MGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITEN
Template Known Secondary structure 


STT



SGGGGG
SB
TTS
BSS
B
SSTT
B

TS




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   329330.........340.........350.........360.........370.........380.........390.........400........
 
   379380........ .390.........400.........410.........420.........430.........440.........450.......
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Query Sequence  GFGAYDKVEE. DGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDM
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Template Sequence  GIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAID. QGADVRGHFTWGLIDNFEWSLG. YSSRFGLVYIDKND. . . . GN
Template Known Secondary structure 


TT
TT

STT

.TT


SB



GGGG.GG

STTT....TT
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   409410.........420.........430.........440.... .....450.........460...... ...470.........480 ..
 
   458.460.........470....
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Query Sequence  SRSRKKSFNWYKEVIAS
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Template Sequence  KRKLKKSAKWFSKFNSV
Template Known Secondary structure 
TT
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   483......490.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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