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Job DescriptionQ46829
Confidence49.95%DateThu Jan 5 12:34:51 GMT 2012
Rank268Aligned Residues56
% Identity18%Templatec1ea9D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:cyclomaltodextrinase; PDBTitle: cyclomaltodextrinase
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.. .... ...140....... ..150.
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Query Sequence  YDDMFDELLKYNIEPVITL. . . . . . . . . . . . . . . . . . . . . . . . . . . SHFE. MPLHLVQQYGS. . . . . . . . . . . . . . WTNR
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Template Sequence  LKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHP
Template Known Secondary structure  TTT



SB

TTSTTT
GGGGGB
BSSSS


SSSS
SB
BSSS
TT
BBB
TTS
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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   152.......160.........
Predicted Secondary structure 
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Query Sequence  KVVDFFVRFAEVVFERYK
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Template Sequence  DVKEYLLKAAEYWIRETG
Template Known Secondary structure  T
Template Predicted Secondary structure 

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   301........310........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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