Job Description P36647 Confidence 99.05% Date Thu Jan 5 11:53:28 GMT 2012 Rank 4 Aligned Residues 110 % Identity 21% Template d1qvea_ SCOP info Pili subunits Pili subunits Pilin Resolution 1.54

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.						.	.
Predicted Secondary structure																																															.	.												.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																																															.	.												.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		Y	L	R	K	A	A	L	T	D	M	L	Q	T	F	V	P	Y	R	T	A	V	E	L	C	A	L	E	H	G	G	L	D	T	C	D	G	G	S	N	G	I	P	S	P	T	.	.	T	T	R	Y	V	S	A	M	S	V	A	.	.	.	.	.	.	.	K	G	V	V	S	L	T	G	.	.	.	.	.	Q	E
Query Conservation																																															.	.												.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence																																															.	.												.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		E	F	A	R	A	Q	L	S	E	A	M	T	L	A	S	G	L	K	T	K	V	S	D	I	F	S	Q	D	G	S	C	P	A	N	T	A	A	T	A	G	I	E	K	D	T	D	I	N	G	K	Y	V	A	K	V	T	T	G	G	T	A	A	A	S	G	G	C	T	I	V	A	T	M	K	A	S	D	V	A	T
Template Known Secondary structure																	T	T												S	S					S	S		B	T	T	B			G	G	G	S			S	S												T	T											S	S	S	S		G
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	G	L	S	V	V	M	T	P	G	W	D	N	A	N	G	V	T	G	W	T	R	N	C	N	I	Q	S	D	S	A	L	Q	Q	A	C	E	D	V	F	R	F	D	D
Query Conservation
Alig confidence																		.													.
Template Conservation																		.													.
Template Sequence		P	L	R	G	K	T	L	T	L	T	L	G	N	A	D	K	.	G	S	Y	T	W	A	C	T	S	N	A	D	.	N	K	Y	L	P	K	T	C	Q	T	A	T	T	T	T	P
Template Known Secondary structure		G	G	T	T										T	T	T	.	S	S								S	S		.	G	G	G	S		G	G	G
Template Predicted Secondary structure																		.													.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions