 |
Job Description | P30140 | Confidence | 41.28% | Date | Thu Jan 5 11:46:06 GMT 2012 |
Rank | 282 | Aligned Residues | 62 |
% Identity | 18% | Template | d2bhua3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.1 |
|
 |
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | T | E | Y | A | E | L | K | Q | L | G | L | D | G | V | M | V | Y | Q | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | Y | H | E | A | T | Y | A | R | H | H | L | K | G | K | K | Q | D | F | F | W | R | L | E | T | P | D | R | L | G | R | A | G | I | D | K | I | G | L | G | A | L | I | G | L |
Query Conservation |   |
  |
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   | . | . |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
| . |   |
|
|
|
|   |
|   |
|
|
Template Sequence |   |
A | E | K | L | P | Y | L | K | E | L | G | V | T | A | I | Q | V | M | P | L | A | A | F | D | G | Q | R | G | W | G | Y | D | G | A | A | F | Y | A | P | Y | A | P | . |
. |
Y | G | R | P | E | D | L | M | A | L | V | D | A | A | H | R | L | G | L | . |
G | V | F | L | D | V | V | Y | N | H |
Template Known Secondary structure |   |
 |  | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|  |  |
| S | S | S |
|
|
| S | T | T |
|
|  |  |  |  |  |
| G | G | . | . | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  |  |  |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
. | . | 210 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|