 |
Job Description | P30140 | Confidence | 76.53% | Date | Thu Jan 5 11:46:06 GMT 2012 |
Rank | 136 | Aligned Residues | 113 |
% Identity | 15% | Template | d1zfja1 |
SCOP info | TIM beta/alpha-barrel
| Inosine monophosphate dehydrogenase (IMPDH)
| Inosine monophosphate dehydrogenase (IMPDH)
|
Resolution | 1.90 |
|
 |
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | I | A | R | E | S | A | A | I | R | E | M | G | F | E | H | L | L | L | V | T | G | E | H | Q | A | K | V | G | M | D | Y | F | R | R | H | L | P | A | L | R | E | Q | F | S | S | L | Q | M | E | V | . |
Q | P | L | A | E | T | E | Y | A | E | L | K | Q | L | G | L | D | G | V | M | V | Y | Q | E | T | Y | H |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   | . |
|   |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|
|   |   |   | . |
|
Template Sequence |   |
S | D | T | F | E | R | A | E | A | L | F | E | A | G | A | D | A | I | V | I | D | T | A | H | G | H | S | . |
. |
. |
. |
A | G | V | L | R | K | I | A | E | I | R | A | H | F | P | N | R | T | L | I | A | G | N | I | A | T | A | E | G | A | R | A | L | Y | D | A | G | V | D | V | V | K | V | G | I | G | P | . |
G |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
| S |
| T | T |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S | S |
| . |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
|
|
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | |
. |
  |
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | T | Y | A | R | H | H | L | K | G | K | K | Q | D | F | F | W | R | L | E | T | P | D | R | L | G | R | A | G | I | D | K | I | G | L | G | A | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
Template Sequence |   |
S | I | C | T | T | R | V | V | A | G | V | G | V | P | Q | V | T | A | I | Y | D | A | A | A | V | A | R | E | Y | G | K | T | I | I | A | D | G | G | I |
Template Known Secondary structure |   |
T | T | B |
|  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|