Return to main results Retrieve Phyre Job Id

Job DescriptionP30140
Confidence48.95%DateThu Jan 5 11:46:06 GMT 2012
Rank249Aligned Residues80
% Identity23%Templated1w0ma_
SCOP infoTIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM)
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120....... ..130.........140.........150...
Predicted Secondary structure 








..........................










..
Query SS confidence 

























. . . . . . . . . . . . . . . . . . . . . . . . . .

























. .
Query Sequence  RKTLDEADIARESAAIREMGFEHLLL. . . . . . . . . . . . . . . . . . . . . . . . . . VTGEHQAKVGMDYFRRHLPALREQFS. .
Query Conservation     

 


          
   
 
..........................  
  
     
 
   
  

    ..
Alig confidence 

























..........................

























..
Template Conservation 


    

   
  
   

  



    
          





  




        
 
             
Template Sequence  EAPLKLNDLARLVAKAKSLGLDVVVCAPDPRTSLAAAALGPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEV
Template Known Secondary structure  TS


TT
SST

S

GGGTTTS



TTS
Template Predicted Secondary structure 




























Template SS confidence 















































































   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   154.....160.........170.........180.
Predicted Secondary structure 










Query SS confidence 



























Query Sequence  SLQMEVQPLAETEYAELKQLGLDGVMVY
Query Conservation   
 
  
 
  
    






     
Alig confidence 



























Template Conservation   

 



    

      







Template Sequence  SVITGAGIESGDDVAAALRLGTRGVLLA
Template Known Secondary structure  SS

STT
S
Template Predicted Secondary structure 







Template SS confidence 



























   175....180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions