Return to main results Retrieve Phyre Job Id

Job DescriptionP30140
Confidence91.67%DateThu Jan 5 11:46:06 GMT 2012
Rank81Aligned Residues239
% Identity11%Templated1rqba2
SCOP infoTIM beta/alpha-barrel Aldolase HMGL-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92....... 100.........110.........120.........130.........140. ........150.........160......
Predicted Secondary structure 







.



















....







Query SS confidence 







.









































. . . .
























Query Sequence  CGFSMSNR. IKRKTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYF. . . . RRHLPALREQFSSLQMEVQPLAETE
Query Conservation 
 
     .     

 


          
   
 
  
  
     
 
....   
  

     
 
  
 
  
 
Alig confidence 







.

































.






....
























Template Conservation   




 
           

 
   
   

  

 
     .                                    
Template Sequence  LVLRDAHQSLXATRXAXEDXVGACADIDAAGYWSVECWGGATY. DSCIRFLNEDPWERLRTFRKLXPNSRLQXLLRGQNL
Template Known Secondary structure 
TTTSTT


GGGTGGGTT
STT.TS



TTS

GGGT
Template Predicted Secondary structure 
























.











Template SS confidence 















































































   1920.........30.........40.........50.........60. ........70.........80.........90.......
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  YAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVDSYMVAEHLLWL
Query Conservation     






      

        
 
   
     

     
   
   
  
 
 

 
    
    
  
  
Alig confidence  .














































































Template Conservation  .                                                
                              
Template Sequence  . LGYRHYNDEVVDRFVDKSAENGXDVFRVFDAXNDPRNXAHAXAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDX
Template Known Secondary structure  .TSSS


TT



TT

TTT





STT

T
Template Predicted Secondary structure  .



















Template SS confidence 















































































   98.100.........110.........120.........130.........140.........150.........160.........170......
 
   247..250.........260.........270.........280.........290.. .......300........ .310.........320.
Predicted Secondary structure 























.







....








Query SS confidence 













































.















. . . .












Query Sequence  QQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQTICAFRLLAP. EIELSLSTRESPWFRD. . . . RVIPLAINNVSAF
Query Conservation            
      
  

          
 

 


 

 

.   
  

      
 ....  
  
   
 

Alig confidence 


.........



.




......

















.















....












Template Conservation 


......... 
 
.

 
 ......  
  
   
  
         
  
 


 


 

 



 


  

 
Template Sequence  GAD. . . . . . . . . SIAL. DXAAL. . . . . . LKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLXKAIEAGVDVVDTA
Template Known Secondary structure  T
S.........
.
TT

......


TT



B
TTS
TT
SB
Template Predicted Secondary structure 


..........




......














Template SS confidence 















































































   177.. 180... ..... .190.........200.........210.........220.........230.........240
 
   322.......330.........340.........350.........360.
Predicted Secondary structure 




























Query SS confidence 







































Query Sequence  SKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQP
Query Conservation       

              
 

  
    
   
  
Alig confidence 

.








............















Template Conservation 
 .




 

 ............ 

 
   
   
  
Template Sequence  IS. SXSLGPGHN. . . . . . . . . . . . PTESVAEXLEGTGYTT
Template Known Secondary structure 
G.GG
STTSB
............BTTTSS
Template Predicted Secondary structure 

.








............





Template SS confidence 







































   242. ......250.. .......260........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions