Job Description P30140 Confidence 96.80% Date Thu Jan 5 11:46:06 GMT 2012 Rank 25 Aligned Residues 225 % Identity 11% Template d1nvma2 SCOP info TIM beta/alpha-barrel Aldolase HMGL-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	F	S	M	S	N	R	I	K	R	K	T	L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	E	.	.	.	.	.	.	.	.	.	.	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	Q	P
Query Conservation																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	L	R	D	G	S	H	A	I	R	H	Q	Y	T	L	D	D	V	R	A	I	A	R	A	L	D	K	A	K	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	R	H	T	D	L	E	Y	I	E	A	V	A	G	E	I	S	H	A	Q	I	A	T	L	L	L	P	G	I
Template Known Secondary structure			T	T	T						T	T	T																		T		S					S		T	T	S	T	T			B	T	T	T	B			S	S											T	T		S	S	S								B	T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	T	E	Y	A	E	L	K	Q	L	G	L	D	G	V	M	V	Y	Q	E	T	Y	H	E	A	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	I	G	L	S	D	N	W	R	V	D	S	Y	M	V	A	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																.
Template Sequence		G	S	V	H	D	L	K	N	A	Y	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	S	K	Q	H	I	E	Y	A	R	N	L	G	M	.	D	T	V	G	F	L	M	M	S	H	M	I	P	A	E	.	K	L	A	E	Q	G	K
Template Known Secondary structure		B												T										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G											T		.								S	T	T	S	S				.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.
Predicted Secondary structure																																																				.																		.	.	.	.
Query SS confidence																																																				.																		.	.	.	.
Query Sequence		H	L	L	W	L	Q	Q	H	Y	W	Q	S	R	Y	S	V	S	F	P	R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	.	P	E	I	E	L	S	L	S	T	R	E	S	P	W	F	R	D	.	.	.	.	R	V	I	P	L	A	I	N
Query Conservation																																																				.																		.	.	.	.
Alig confidence							.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																								.																		.	.	.	.
Template Conservation							.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Sequence		L	M	E	S	Y	.	.	.	.	.	.	G	A	T	C	I	Y	M	.	.	.	.	.	.	.	.	.	A	D	S	G	G	A	M	S	M	N	D	I	R	D	R	M	R	A	F	K	A	V	L	K	P	E	T	Q	V	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	V	A	V	E	E	G	C	D
Template Known Secondary structure							.	.	.	.	.	.	T		S					.	.	.	.	.	.	.	.	.			T	T																			S		T	T	S							B		T	T	S												T	T
Template Predicted Secondary structure							.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.							.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	S	A	F	S	K	T	Q	P	G	G	Y	A	D	N	H	P	E	L	E	Q	F	S	P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q	G	L	Q	P
Query Conservation
Alig confidence									.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	D	A	S	L	A	.	G	M	G	A	G	A	G	N	A	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	V	F	I	A	V	A	E	R	L	G	W	N	H
Template Known Secondary structure						B	G	G	.	G		S	S	T	T		B		.	.	.	.	.	.	.	.	.	.	.	.	B												T		B
Template Predicted Secondary structure									.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.													.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions