 |
Job Description | P30140 | Confidence | 23.44% | Date | Thu Jan 5 11:46:06 GMT 2012 |
Rank | 384 | Aligned Residues | 132 |
% Identity | 11% | Template | d1h4pa_ |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| beta-glycanases
|
Resolution | 1.75 |
|
 |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
L | A | E | T | E | Y | A | E | L | K | Q | L | G | L | D | . |
. |
G | V | M | V | Y | Q | E | T | Y | H | E | A | T | Y | A | R | H | H | L | K | G | K | K | Q | D | F | F | W | R | L | E | T | P | D | R | L | G | R | A | G | I | D | K | I | G | L | G | A | L | I | G | L | S | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
| . | . |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |
| . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
| . |   |
|
|
| . |
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |
|
Template Sequence |   |
Y | Q | E | Q | D | F | A | N | I | A | S | Q | G | F | N | L | V | R | I | P | I | G | Y | W | A | F | Q | I | L | D | D | D | P | Y | V | S | G | . |
. |
. |
L | Q | E | S | Y | L | D | Q | A | I | G | W | A | R | N | N | S | L | . |
K | V | W | V | . |
D | L | H | G | A | A | G | S | Q | N | G | F | D | N | S | G |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | G | G | G | T |
|
|
| T | T |
|
|
|
|
| S | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  | . |  |  |  |  |
| T | T |
| S | S |
|
| G | G | G | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
|
|
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | |
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | |
|
|
. | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
N | W | R | V | D | S | Y | M | V | A | E | H | L | L | W | L | Q | Q | H | Y | W | Q | S | . |
. |
. |
R | Y | S | V | S | F | P | R | L | R | P | C | T | G | G | I | E | P | A | S | I | M | D | E | R | Q | L | V | Q | T | I | C | A | F | R | L | L | A | P | E | I | E | L | S | L |
Query Conservation |   |
. | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |
|
|   |
|
|   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
L | R | D | S | Y | K | F | L | E | D | S | N | L | A | V | T | I | N | V | L | N | Y | I | L | K | K | Y | S | A | E | E | Y | L | D | I | V | I | G | I | E | L | I | N | E | P | L | G | P | V | L | D | M | D | K | M | K | N | D | Y | L | A | P | A | Y | E | Y | L | R | N | N | I | K | S | D | Q | V | I | I |
Template Known Secondary structure |   |
S | T | T |
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T |  |  |  |  |  | S |
| S |
|
|
| G | G | G | S |
|  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|