 |
Job Description | P30140 | Confidence | 23.19% | Date | Thu Jan 5 11:46:06 GMT 2012 |
Rank | 385 | Aligned Residues | 104 |
% Identity | 12% | Template | d1gkra2 |
SCOP info | TIM beta/alpha-barrel
| Metallo-dependent hydrolases
| Hydantoinase (dihydropyrimidinase), catalytic domain
|
Resolution | 2.60 |
|
 |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | R | E | S | A | A | I | R | E | M | G | F | E | H | L | L | L | V | T | G | E | H | Q | A | K | V | G | M | D | Y | F | R | R | H | L | P | A | L | R | E | Q | F | S | . |
. |
. |
S | L | Q | M | E | V | Q | P | L | A | E | T | E | Y | A | E | L | K | Q | L | G | L | D | G | V | M | V | Y | Q | E | T | Y | H |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |   |   | . | . | . |   |
|   |
|   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
F | E | L | D | S | E | S | A | A | V | G | G | I | T | T | I | I | E | M | P | I | T | F | P | P | T | T | T | L | D | A | F | L | E | K | K | K | Q | A | G | Q | R | L | K | V | D | F | A | L | Y | G | G | G | V | P | G | N | L | P | E | I | R | K | M | H | D | A | G | A | V | G | F | S | M | M | A | A | S | V | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |
| S |
| S | S | S |
| S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  | B |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
| B |
|
| B | S | S |
| S | B | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | T | Y | A | R | H | H | L | K | G | K | K | Q | D | F | F | W | R | L | E | T | P | D | R | L | G | R | A | G | I | D | K | I | G | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   | . |   |   |   |   |
Template Sequence |   |
G | M | . |
. |
. |
. |
. |
. |
. |
. |
F | D | A | V | S | D | G | E | L | F | E | I | F | Q | E | I | A | A | C | G | S | . |
V | I | V | V |
Template Known Secondary structure |   |
T | T | . | . | . | . | . | . | . | . | B |
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | |
|
|
|
|
|
|
|
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
. | 180 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|