Return to main results Retrieve Phyre Job Id

Job DescriptionP30140
Confidence42.21%DateThu Jan 5 11:46:06 GMT 2012
Rank278Aligned Residues127
% Identity6%Templated1djqa1
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  SGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREMGFEHLLLVTG
Query Conservation     
  
   
  

    
  
     
  

 
   
 

 
          

 


          
   
 
  
Alig confidence 

















.
















...............




























Template Conservation 


 

  


  

   .
 
  
  
        ...............      
        
   


 
 

 
Template Sequence  ENRARFWLETLEKVKHAV. GSDCAIATRFGVDTVYG. . . . . . . . . . . . . . . PGQIEAEVDGQKFVEMADSLVDMWDITIG
Template Known Secondary structure  .TTTS
SS
...............TTS

TTTTTT
SS
Template Predicted Secondary structure 
.











...............












Template SS confidence 















































































   196...200.........210... ......220.........230 .........240.........250.........
 
   131. .......140.........150.........160.. .......170.... .....180 .........190...
Predicted Secondary structure 

.........











.


.

.





Query SS confidence 

. . . . . . . . .





























.











.





.












Query Sequence  EH. . . . . . . . . QAKVGMDYFRRHLPALREQFSSLQMEVQPL. AETEYAELKQLG. LDGVMV. YQETYHEATYARH
Query Conservation    .........
     
 
   
  

     
 
  
 
.  
    




.

    .  

        
Alig confidence 

.........





























.











.





.












Template Conservation                            

    



  


   
 
   
  
  
 
 


  



 
  
 
Template Sequence  DIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKV
Template Known Secondary structure 
STTGGGTS

TTT

TTTTTT
SS

S



TTS
SBS
TT
Template Predicted Secondary structure 



































Template SS confidence 










































































   260.........270.........280.........290.........300.........310.........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions