Job Description P30140 Confidence 89.59% Date Thu Jan 5 11:46:06 GMT 2012 Rank 91 Aligned Residues 199 % Identity 16% Template c3qc3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution Resolution 2.20 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																			.	.	.														.
Query SS confidence																																																			.	.	.														.
Query Sequence		L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	.	.	.	S	L	Q	M	E	V	Q	P	L	A	E	T	E	.	Y	A	E	L	K	Q	L	G	L	D	G	V	M	V
Query Conservation																																																			.	.	.														.
Alig confidence																																																			.	.	.														.
Template Conservation
Template Sequence		S	D	L	A	N	L	G	A	E	C	L	R	X	L	D	S	G	A	D	Y	L	H	L	D	V	X	D	G	H	F	V	P	N	I	T	F	G	H	P	V	V	E	S	L	R	K	Q	L	G	Q	D	P	F	F	D	X	H	X	X	V	S	K	P	E	Q	W	V	K	P	X	A	V	A	G	A	N	Q	Y	T	F
Template Known Secondary structure		S		G	G	G											T	T		S								B	S	S	S	S	S		B																S	S	S									S													T		S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	E	T	Y	H	E	A	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	I	G	L	S	D	N	W	R	V	D	S	Y	M	V	A	E	H	L	L	W	L	Q	Q	H	Y	W	Q	S	R	Y	S	V	S	F	P
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	E	A	T	E	N	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	I	K	D	I	R	E	N	G	X	.	K	V	G	L	A	I	K	P	G	T	S	V	E	Y	L	A	P	W	A	N	Q	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	A	L	V	X
Template Known Secondary structure			G	G	G		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T		.								T	T	S		G	G	G	G	T	T	T	G	G	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.																		.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.															.	.	.	140	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	P	E	I	E	L	S	L	S	T	R	E	S	P	W	F	R	D	R	V	I	P	L	A	I	N	N	V	S	A	F	S	K	T	Q	P	G	G	Y	A	D	N	H	P	E	L	E	Q	F	S
Query Conservation
Alig confidence															.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	E	P	G	F	G	G	Q	K	F	X	E	.	.	.	.	.	D	X	X	P	K	V	H	W	L	R	T	Q	F	P	S	L	D	I	E	V	D	G	G	V	G	P	D	T	V	H	K	C	A	E	A	G	A	N	X	I	V	S	G	S	A	I	X	R	S	E	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S		T	T		S	S					G	.	.	.	.	.	G	G												T	T							S	S		S	T	T	T								T												T		S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	D	P	R	S	V	I	N	L	L	R	N	V
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							205	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions