Return to main results Retrieve Phyre Job Id

Job DescriptionP30140
Confidence84.58%DateThu Jan 5 11:46:06 GMT 2012
Rank107Aligned Residues91
% Identity8%Templatec3kruC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130. ........140.........150.........160.. .......170.... .....
Predicted Secondary structure 








...












.


.

Query SS confidence 


























. . .






























.











.




Query Sequence  LDEADIARESAAIREMGFEHLLLVTGE. . . HQAKVGMDYFRRHLPALREQFSSLQMEVQPL. AETEYAELKQLG. LDGVM
Query Conservation 

 


          
   
 
  
 ... 
     
 
   
  

     
 
  
 
.  
    




.

   
Alig confidence 












.












...






























.











.




Template Conservation     

       
.  


 
 

 
                    

    



  


   
 
   
  
  
 
 
Template Sequence  INIDMMVEYINMI. KDKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVA
Template Known Secondary structure 

.TTT
S


SS






TTTTT

SS


TTS
S
Template Predicted Secondary structure 

.


































Template SS confidence 















































































   227..230......... 240.........250.........260.........270.........280.........290.........300.....
 
   180 .........190......
Predicted Secondary structure  .








Query SS confidence 
.















Query Sequence  V. YQETYHEATYARHHLK
Query Conservation   .  

        
 
 
Alig confidence 
.















Template Conservation 


  



 
  

  
Template Sequence  LGRELLRNPYWVLHTYTS
Template Known Secondary structure  S
TT
SS
Template Predicted Secondary structure 




Template SS confidence 

















   306...310.........320...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions