Job Description P30140 Confidence 97.19% Date Thu Jan 5 11:46:06 GMT 2012 Rank 20 Aligned Residues 228 % Identity 11% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		C	G	F	S	M	S	N	R	I	K	R	K	T	L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	.	Q	P	L	A	E	T	E	Y	A	E	L
Query Conservation																																																																						.
Alig confidence																																								.	.	.									.	.																		.
Template Conservation																																								.	.	.									.	.
Template Sequence		S	T	L	R	E	G	E	Q	F	A	N	A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	.	.	.	P	V	A	S	E	Q	S	R	.	.	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A
Template Known Secondary structure			T	T	T	G	G	G	G	S	T	T																			T		S							.	.	.	G	G	G						.	.								T	S			S	S								S
Template Predicted Secondary structure																																								.	.	.									.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	L	G	L	D	G	V	M	V	Y	Q	E	T	Y	H	E	A	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	I	G	L	S	D	N	W	R	V	D	S	Y	M	V	A	E	H	L	L	W	L	Q	Q	H	Y
Query Conservation
Alig confidence																		.	.								.																						.										.																			.	.	.	.
Template Conservation																		.	.								.																						.										.																			.	.	.	.
Template Sequence		V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	.	.	Y	L	R	K	Y	S	H	.	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	.	E	V	R	F	S	S	E	D	S	.	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	.	.	.	.
Template Known Secondary structure				T	T		S								G	G	G	.	.								.																			T	T		.							T	T	G	.	G	G	S																.	.	.	.
Template Predicted Secondary structure																		.	.								.																						.										.																			.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		W	Q	S	R	Y	S	V	S	F	P	R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	P	E	I	E	L	S	L	S	.	.	.	.	T	R	E	S	P	W	F	R	D	R	V	I	P	L	A	I	N	N	V	S	A	F	S	K	T	Q	P
Query Conservation																																																			.	.	.	.
Alig confidence		.	.								.	.	.	.	.	.	.	.	.																							.									.	.	.	.																									.
Template Conservation		.	.								.	.	.	.	.	.	.	.	.																							.																																					.
Template Sequence		.	.	G	V	N	R	V	G	I	.	.	.	.	.	.	.	.	.	A	D	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	.	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I	D	T	S	I	L	.	G	I
Template Known Secondary structure		.	.			S					.	.	.	.	.	.	.	.	.			S	S	S																		.		S	S							B		T	T	S													T							B	G	G	.	G
Template Predicted Secondary structure		.	.								.	.	.	.	.	.	.	.	.																							.																																					.
Template SS confidence
				188	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Y	A	D	N	H	P	E	L	E	Q	F	S	P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	R	N	G	I	T	.	.	.	.	.	.	.	.	.	.	.	.	P	L	G	A	L	L	A	R	M	Y	V	T	D
Template Known Secondary structure		S	S	T	T		B		.	.	.	.	.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.													.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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