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Job DescriptionP30140
Confidence95.24%DateThu Jan 5 11:46:06 GMT 2012
Rank40Aligned Residues200
% Identity13%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150... ......160...... ...170.........180.
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Query Sequence  LDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFS. . SLQMEVQPLAETE. YAELKQLGLDGVMVY
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Template Sequence  ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFH
Template Known Secondary structure  S
GGGTT


BSSSSS
B


T

S

SS
T
S
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
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Query Sequence  QETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVDSYMVAEHLLWLQQHYWQSRYSVSFPR
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Template Sequence  PE. . . . . . . . . . . . . . . . . ASEHIDRSLQLIKSFGI. QAGLALNPATGIDCLK. . . . . . . . . . . . . . . . . YVESNIDRVL
Template Known Secondary structure  GG.................G
S
TTTS.
TT

SGGGT.................TTGGG
S
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   93. .....100.........110. ........120....... ..130.......
 
   262.......270.........280.........290.........300.........310.........320.........330.........340.
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Query Sequence  LRPCTGGIEPASIMDERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSP
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Template Sequence  IMSVNPGFQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSD. . . . . . . . . . . . .
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S
TT




TTTS

SS

TTTTTT

STSS.............
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   138.140.........150.........160.........170.........180.........190.........200....
 
   342.......350......
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Query Sequence  HDDRRPEAVAAALTA
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Template Sequence  . . . . SYKQTIDKMRD
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   207..210.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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