 |
Job Description | P30140 | Confidence | 48.49% | Date | Thu Jan 5 11:46:06 GMT 2012 |
Rank | 250 | Aligned Residues | 63 |
% Identity | 17% | Template | c3faxA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:reticulocyte binding protein; |
PDBTitle: the crystal structure of gbs pullulanase sap in complex with2 maltotetraose
|
Resolution | 2.40 Å |
|
 |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
. | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | Y | A | E | L | K | Q | L | G | L | D | G | V | M | V | . |
. |
Y | Q | E | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | H | E | A | T | Y | A | R | H | H | L | K | . |
G | K | K | Q | D | . |
. |
. |
. |
. |
F | F | W | R | L | E | T | P | D | R | L |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   | . | . |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   | . |   |   |
|   |   | . | . | . | . | . |   |   |   |
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |
Template Sequence |   |
E | K | L | D | Y | L | Q | K | L | G | V | T | H | I | Q | L | L | P | V | L | S | Y | F | Y | V | N | E | M | D | K | S | R | S | T | A | Y | T | S | S | D | N | N | Y | N | W | G | Y | D | P | Q | S | Y | F | A | L | S | G | M | Y | S | E | K | P | K | D | P | S | A | R | I | A | E | L | K | Q | L | I | H | D | I |
Template Known Secondary structure |   |
 | T |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S |
|
| B |
| B | S | S |
| B | T | T |
|
|
|
|
|
| S |
|
| S | S | S |
| S |
|
|
| S |
| S | B | S |
| S | S | S | B |
| G | G | G |
| S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
645 | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . |
  |
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | A | G | I | D | K | I | G | L | G | A | L | I | G | L |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
| . |   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
H | K | R | G | M | . |
G | V | I | L | D | V | V | Y | N | H |
Template Known Secondary structure |   |
 |  | T | T |
| . |  |  |  |  |  |  |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |
|
|
| . |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
725 | . | . | . | . | |
730 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|