Job Description P30140 Confidence 95.00% Date Thu Jan 5 11:46:06 GMT 2012 Rank 46 Aligned Residues 233 % Identity 8% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		C	G	F	S	M	S	N	R	I	K	R	K	T	L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	Q	P	L	A	E	T	E	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence										.	.	.	.	.																														.	.	.	.	.																													.	.	.	.	.
Template Conservation										.	.	.	.	.																														.	.	.	.	.
Template Sequence		T	T	L	R	D	G	E	N	.	.	.	.	.	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	F	P	I	S	S	.	.	.	.	.	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	V	E	G	D	I	D	R	A
Template Known Secondary structure			T	T	T					.	.	.	.	.																	T		S							G	G	G		.	.	.	.	.																S	S								S	S
Template Predicted Secondary structure										.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	E	L	K	Q	L	G	L	D	G	V	M	V	Y	Q	E	T	Y	H	E	A	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	I	G	L	S	D	N	W	R	V	D	S	Y	M	V	A	E	H	L	L	W	L
Query Conservation
Alig confidence																				.																																	.														.
Template Conservation																				.																																	.														.
Template Sequence		E	E	A	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	.	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	.	V	V	Q	F	S	P	E	D	A	T	R	S	D	.	R	A	F	L	I	E	A	V	Q	T	A	I	D	A
Template Known Secondary structure						T	T		S	S										.	S							T	T																				T	T		S	.								T	G	G	G	S		.														T
Template Predicted Secondary structure																				.																																	.														.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		Q	Q	H	Y	W	Q	S	R	Y	S	V	S	F	P	R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	P	.	.	.	E	I	E	L	S	L	S	T	R	E	S	P	W	F	R	D	R	V	I	P	L	A	I	N	N	V	S	A	F	S	K
Query Conservation																																																.	.	.
Alig confidence		.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																									.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Sequence		.	.	.	.	.	.	G	A	T	V	I	N	I	.	.	.	.	.	.	.	.	.	P	D	T	V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A	T	A	N	A	L	A	A	.	.	.	I	E	N	G	A	R
Template Known Secondary structure		.	.	.	.	.	.	T							.	.	.	.	.	.	.	.	.			S	S	S																			T	T	G	G	G	S							B		T	T	S										.	.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																																																		.	.	.
Template SS confidence
								161	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.					.	.	360	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		T	Q	P	G	G	Y	A	D	N	H	P	E	L	E	Q	F	S	P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q	.	.	.	.	G	L	Q	P
Query Conservation																																				.	.	.	.
Alig confidence																.	.	.	.	.	.															.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		R	V	E	G	T	I	N	G	I	G	E	R	A	G	.	.	.	.	.	.	N	T	A	L	E	E	V	A	V	A	L	H	I	R	K	D	F	Y	Q	A	E	T
Template Known Secondary structure						B	G	G	G			T	T	T		.	.	.	.	.	.	B		B											T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions